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  5. LOC_Os01g16910.1

LOC_Os01g16910.1 (TOM40, LOC_Os01g16910)


Aliases : TOM40, LOC_Os01g16910

Description : component Tom40 of outer mitochondrion membrane TOM translocation system


Gene families : OG0002328 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002328_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g16910.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00119p00124540 TOM40,... Protein translocation.mitochondrion.outer mitochondrion... 0.03 OrthoFinder output from all 47 species
AT3G20000 TOM40 translocase of the outer mitochondrial membrane 40 0.19 OrthoFinder output from all 47 species
Adi_g022168 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Adi_g082046 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Aev_g01304 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Ala_g01261 TOM40 channel-forming component *(Tom40) of outer... 0.05 OrthoFinder output from all 47 species
Als_g19212 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Als_g28538 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Aop_g01186 TOM40 channel-forming component *(Tom40) of outer... 0.09 OrthoFinder output from all 47 species
Aop_g32727 TOM40 channel-forming component *(Tom40) of outer... 0.05 OrthoFinder output from all 47 species
Aspi01Gene36983.t2 TOM40, Aspi01Gene36983 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000890 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Azfi_s0092.g042988 TOM40 channel-forming component *(Tom40) of outer... 0.1 OrthoFinder output from all 47 species
Cba_g13008 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Cba_g21879 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Ceric.22G037300.1 TOM40, Ceric.22G037300 channel-forming component *(Tom40) of outer... 0.06 OrthoFinder output from all 47 species
Cre10.g424450 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.02 OrthoFinder output from all 47 species
Dac_g04134 TOM40 channel-forming component *(Tom40) of outer... 0.07 OrthoFinder output from all 47 species
Dac_g36688 TOM40 channel-forming component *(Tom40) of outer... 0.06 OrthoFinder output from all 47 species
Dcu_g11812 TOM40 channel-forming component *(Tom40) of outer... 0.05 OrthoFinder output from all 47 species
GSVIVT01038525001 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.09 OrthoFinder output from all 47 species
Gb_29141 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.03 OrthoFinder output from all 47 species
Len_g03704 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Lfl_g27096 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
MA_17884g0010 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.01 OrthoFinder output from all 47 species
MA_27666g0010 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.08 OrthoFinder output from all 47 species
Mp3g10590.1 TOM40 component Tom40 of outer mitochondrion membrane TOM... 0.05 OrthoFinder output from all 47 species
Nbi_g00868 TOM40 channel-forming component *(Tom40) of outer... 0.03 OrthoFinder output from all 47 species
Sam_g07859 No alias channel-forming component *(Tom40) of outer... 0.08 OrthoFinder output from all 47 species
Sam_g48816 No alias channel-forming component *(Tom40) of outer... 0.09 OrthoFinder output from all 47 species
Smo403082 TOM40 Protein translocation.mitochondrion.outer mitochondrion... 0.04 OrthoFinder output from all 47 species
Solyc06g007710.4.1 TOM40, Solyc06g007710 component Tom40 of outer mitochondrion membrane TOM... 0.15 OrthoFinder output from all 47 species
Solyc06g082793.1.1 TOM40, Solyc06g082793 component Tom40 of outer mitochondrion membrane TOM... 0.18 OrthoFinder output from all 47 species
Spa_g23679 TOM40 channel-forming component *(Tom40) of outer... 0.02 OrthoFinder output from all 47 species
Spa_g29708 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Spa_g48614 TOM40 channel-forming component *(Tom40) of outer... 0.07 OrthoFinder output from all 47 species
Spa_g54862 TOM40 channel-forming component *(Tom40) of outer... 0.07 OrthoFinder output from all 47 species
Tin_g01764 TOM40 channel-forming component *(Tom40) of outer... 0.04 OrthoFinder output from all 47 species
Zm00001e025489_P003 TOM40, Zm00001e025489 component Tom40 of outer mitochondrion membrane TOM... 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000105 histidine biosynthetic process IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
CC GO:0000178 exosome (RNase complex) IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006547 histidine metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008097 5S rRNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1905354 exoribonuclease complex IEP HCCA
InterPro domains Description Start Stop
IPR027246 Porin_Euk/Tom40 53 338
No external refs found!