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  5. LOC_Os01g16650.1

LOC_Os01g16650.1 (UBC20, LOC_Os01g16650)


Aliases : UBC20, LOC_Os01g16650

Description : E2 ubiquitin conjugating protein (APC/C)


Gene families : OG0002468 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002468_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g16650.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00175140 UBC20,... Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.13 OrthoFinder output from all 47 species
Aev_g39224 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05340 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37477 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene03142.t1 UBC19, Aspi01Gene03142 E2 ubiquitin-conjugating protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61364.t1 UBC20, Aspi01Gene61364 E2 ubiquitin-conjugating protein & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.25G015500.1 UBC19, Ceric.25G015500 E2 ubiquitin-conjugating protein & original description:... 0.09 OrthoFinder output from all 47 species
Dac_g03134 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04248 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g30508 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g20005 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01031547001 UBC20 Cell cycle.mitosis and meiosis.metaphase to anaphase... 0.05 OrthoFinder output from all 47 species
Gb_38981 UBC19 E2 ubiquitin conjugating protein (APC/C) 0.03 OrthoFinder output from all 47 species
Len_g15646 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11955 UBC19 E2 ubiquitin-conjugating protein & original description: none 0.08 OrthoFinder output from all 47 species
Mp3g21700.1 UBC19 E2 ubiquitin conjugating protein (APC/C) 0.02 OrthoFinder output from all 47 species
Msp_g02664 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.08 OrthoFinder output from all 47 species
Nbi_g38909 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g44236 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g44237 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37401 No alias E2 ubiquitin-conjugating protein & original description: none 0.07 OrthoFinder output from all 47 species
Solyc11g065190.3.1 UBC20, Solyc11g065190 E2 ubiquitin conjugating protein (APC/C) 0.13 OrthoFinder output from all 47 species
Spa_g48430 UBC20 E2 ubiquitin-conjugating protein & original description: none 0.08 OrthoFinder output from all 47 species
Zm00001e017345_P001 UBC20, Zm00001e017345 E2 ubiquitin conjugating protein (APC/C) 0.15 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 51 185
No external refs found!