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  5. LOC_Os01g15460.1

LOC_Os01g15460.1 (LOC_Os01g15460)


Aliases : LOC_Os01g15460

Description : C3H zinc finger transcription factor


Gene families : OG0000297 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g15460.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00193570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C3H zinc... 0.03 OrthoFinder output from all 47 species
Adi_g056900 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Als_g34158 ZFN1 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aop_g01333 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene02854.t1 ZFN3, Aspi01Gene02854 regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Dde_g12571 ZFN1 regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
MA_1139g0010 ZFN1 C3H zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Sam_g50915 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 156 180
IPR000571 Znf_CCCH 111 135
IPR000571 Znf_CCCH 357 380
IPR000571 Znf_CCCH 61 86
IPR000571 Znf_CCCH 309 334
No external refs found!