LOC_Os01g15010.1 (SAR2, ATSARA1C,...)

Aliases : SAR2, ATSARA1C, ATSAR2, ASAR1, LOC_Os01g15010

Description : GTPase (Sar1)

Gene families : OG0001158 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001158_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g15010.1
Cluster	HCCA: Cluster_171

Target	Alias	Description	ECC score	Gene Family Method
Ala_g00459	No alias	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g07979	SAR1, ATSAR1B,...	small GTPase *(Sar1) & original description: none	0.05	OrthoFinder output from all 47 species
Lfl_g23865	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g05207	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.03	OrthoFinder output from all 47 species
Smo179259	SAR2, ATSARA1C,...	Vesicle trafficking.Coat protein II (COPII) coatomer...	0.05	OrthoFinder output from all 47 species
Spa_g49187	SAR2, ATSARA1C,...	small GTPase *(Sar1) & original description: none	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	8	192

External Links

No external refs found!