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  5. LOC_Os01g13480.1

LOC_Os01g13480.1 (LOC_Os01g13480)


Aliases : LOC_Os01g13480

Description : actin filament-bundling factor (THRUMIN)


Gene families : OG0000162 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000162_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13480.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00225580 evm_27.TU.AmTr_v1... Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.03 OrthoFinder output from all 47 species
AT1G64500 No alias Glutaredoxin family protein 0.12 OrthoFinder output from all 47 species
Ala_g13283 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Als_g10341 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Aop_g14853 No alias actin filament-bundling factor *(THRUMIN) & original... 0.05 OrthoFinder output from all 47 species
Aop_g26067 No alias actin filament-bundling factor *(THRUMIN) & original... 0.08 OrthoFinder output from all 47 species
Aspi01Gene54978.t1 Aspi01Gene54978 actin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0090.g042605 No alias not classified & original description: CDS=1-1131 0.13 OrthoFinder output from all 47 species
Cba_g01999 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Cba_g38411 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G069000.1 Ceric.03G069000 actin filament-bundling factor *(THRUMIN) & original... 0.09 OrthoFinder output from all 47 species
Dac_g01599 No alias actin filament-bundling factor *(THRUMIN) & original... 0.06 OrthoFinder output from all 47 species
Dac_g23182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g39355 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Dde_g18247 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Dde_g24691 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01019562001 No alias No description available 0.07 OrthoFinder output from all 47 species
Len_g30170 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g56975 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g10825 No alias actin filament-bundling factor *(THRUMIN) & original... 0.07 OrthoFinder output from all 47 species
Msp_g29256 No alias actin filament-bundling factor *(THRUMIN) & original... 0.07 OrthoFinder output from all 47 species
Nbi_g01301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04826 No alias actin filament-bundling factor *(THRUMIN) & original... 0.08 OrthoFinder output from all 47 species
Nbi_g06898 No alias actin filament-bundling factor *(THRUMIN) & original... 0.08 OrthoFinder output from all 47 species
Pir_g07428 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Pir_g14419 No alias actin filament-bundling factor *(THRUMIN) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g47065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30402 No alias actin filament-bundling factor *(THRUMIN) & original... 0.03 OrthoFinder output from all 47 species
Smo116000 No alias Cytoskeleton.cp-actin-dependent plastid movement.THRUMIN... 0.07 OrthoFinder output from all 47 species
Solyc08g082590.3.1 Solyc08g082590 actin filament-bundling factor (THRUMIN) 0.07 OrthoFinder output from all 47 species
Tin_g07425 No alias acTin filament-bundling factor *(THRUMIN) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016368_P001 Zm00001e016368 actin filament-bundling factor (THRUMIN) 0.03 OrthoFinder output from all 47 species
Zm00001e032843_P001 Zm00001e032843 Uncharacterized protein At5g39865 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!