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  5. LOC_Os01g13229.1

LOC_Os01g13229.1 (CYCA1;1, LOC_Os01g13229)


Aliases : CYCA1;1, LOC_Os01g13229

Description : cyclin (CYCA)


Gene families : OG0001097 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13229.1

Target Alias Description ECC score Gene Family Method Actions
Ala_g21059 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Ala_g25625 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Dde_g11191 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Gb_03779 CYC3B, CYCA2;2, CYC2BAT cyclin (CYCA) 0.02 OrthoFinder output from all 47 species
Len_g01814 CYCA1;1 regulatory protein *(CYCA) of cell cycle & original... 0.03 OrthoFinder output from all 47 species
Len_g21318 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Len_g32319 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.03 OrthoFinder output from all 47 species
Ppi_g07555 CYCA1;1 regulatory protein *(TAM) involved in metaphase to... 0.02 OrthoFinder output from all 47 species
Sam_g12488 No alias regulatory protein *(TAM) involved in metaphase to... 0.01 OrthoFinder output from all 47 species
Sam_g12489 No alias regulatory protein *(TAM) involved in metaphase to... 0.01 OrthoFinder output from all 47 species
Sam_g51377 No alias regulatory protein *(TAM) involved in metaphase to... 0.01 OrthoFinder output from all 47 species
Solyc10g049360.2.1 CYCA3;1, Solyc10g049360 cyclin (CYCA) 0.05 OrthoFinder output from all 47 species
Solyc12g088530.2.1 CYCA3;1, Solyc12g088530 cyclin (CYCA) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
InterPro domains Description Start Stop
IPR006671 Cyclin_N 403 505
IPR004367 Cyclin_C-dom 519 637
No external refs found!