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  5. LOC_Os01g13210.1

LOC_Os01g13210.1 (PCAP1, ATPCAP1, LOC_Os01g13210)


Aliases : PCAP1, ATPCAP1, LOC_Os01g13210

Description : Salt stress root protein RS1 OS=Oryza sativa subsp. indica (sp|a2wmg6|srs1_orysi : 139.0)


Gene families : OG0002064 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13210.1
Cluster HCCA: Cluster_10

Target Alias Description ECC score Gene Family Method Actions
Als_g37493 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Als_g38442 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.03 OrthoFinder output from all 47 species
Dac_g01326 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.04 OrthoFinder output from all 47 species
Gb_32620 PCAP1, ATPCAP1 Plasma membrane-associated cation-binding protein 1... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0162.g023991 PCAP1, ATPCAP1 phosphoinositide signalling effector *(PCaP) & original... 0.02 OrthoFinder output from all 47 species
Zm00001e016382_P004 PCAP1, ATPCAP1,... Salt stress root protein RS1 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
Zm00001e026124_P001 Zm00001e026124 Salt stress root protein RS1 OS=Oryza sativa subsp.... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0046658 obsolete anchored component of plasma membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP HCCA
MF GO:0004620 phospholipase activity IEP HCCA
MF GO:0004629 phospholipase C activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR008469 DREPP 3 192
No external refs found!