LOC_Os01g13000.1 (LOC_Os01g13000)


Aliases : LOC_Os01g13000

Description : transcription factor (bHLH)


Gene families : OG0000725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000725_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g13000.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00114170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00167p00019840 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AT1G31050 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
AT1G49830 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g075408 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g080196 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g20162 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05285 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31883 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene00926.t1 Aspi01Gene00926 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0247.g060091 No alias bHLH-type transcription factor & original description: CDS=1-450 0.04 OrthoFinder output from all 47 species
Ceric.32G003100.1 Ceric.32G003100 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.33G029000.1 Ceric.33G029000 not classified & original description: pacid=50607112... 0.03 OrthoFinder output from all 47 species
Dde_g23407 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g09942 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14173 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18517 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18956 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g26124 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01005301001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01010280001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01014542001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01018886001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Len_g46884 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Mp2g19970.1 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Msp_g10107 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15621 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g38619 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g25157 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g37653 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18804 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07556 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g05050 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g09562 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g16504 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16505 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g18174 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18175 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Solyc03g120530.3.1 Solyc03g120530 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc07g020960.3.1 Solyc07g020960 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc07g063830.3.1 Solyc07g063830 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc10g006640.3.1 Solyc10g006640 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Spa_g15320 No alias bHLH-type transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g44400 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e014179_P003 Zm00001e014179 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e034854_P002 Zm00001e034854 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e041465_P001 Zm00001e041465 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!