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  5. LOC_Os01g12730.1

LOC_Os01g12730.1 (AtRABG3d, RABG3d,...)


Aliases : AtRABG3d, RABG3d, LOC_Os01g12730

Description : G-class RAB GTPase


Gene families : OG0000865 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000865_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12730.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00072050 AtRABG3d,... Vesicle trafficking.regulation of membrane tethering and... 0.04 OrthoFinder output from all 47 species
AT1G22740 ATRABG3B,... RAB GTPase homolog G3B 0.02 OrthoFinder output from all 47 species
AT1G52280 AtRABG3d, RABG3d RAB GTPase homolog G3D 0.03 OrthoFinder output from all 47 species
Adi_g078228 ATRAB7B, RAB7B,... G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03102 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13739.t1 AtRABG3d,... G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g04092 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08054 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species
Mp8g13820.1 AtRABG3d, RABG3d G-class RAB GTPase 0.07 OrthoFinder output from all 47 species
Pir_g40856 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g07442 No alias G-class RAB GTPase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109520.3.1 ATRAB7B, RAB7B,... G-class RAB GTPase 0.04 OrthoFinder output from all 47 species
Spa_g12567 ATRABG3C, ATRAB7D, RABG3c G-class RAB GTPase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53072 AtRABG3d, RABG3d G-class RAB GTPase & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 10 176
No external refs found!