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  5. LOC_Os01g12520.1

LOC_Os01g12520.1 (ATMBAC2, BAC2, LOC_Os01g12520)


Aliases : ATMBAC2, BAC2, LOC_Os01g12520

Description : solute transporter (MTCC)


Gene families : OG0000680 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000680_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12520.1
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AT1G79900 ATMBAC2, BAC2 Mitochondrial substrate carrier family protein 0.03 OrthoFinder output from all 47 species
Ala_g08994 BOU solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01405 BOU solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011011 BOU solute transporter *(MTCC) & original description: CDS=1-930 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026638 ATMBAC1, MBAC1 solute transporter *(MTCC) & original description: CDS=238-1239 0.02 OrthoFinder output from all 47 species
Cba_g31517 ATMBAC2, BAC2 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.30G033000.1 BOU, Ceric.30G033000 solute transporter *(MTCC) & original description:... 0.04 OrthoFinder output from all 47 species
Dcu_g02532 BOU solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017089001 ATMBAC2, BAC2 Solute transport.carrier-mediated transport.MC-type... 0.04 OrthoFinder output from all 47 species
Gb_33596 BOU solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
LOC_Os10g42299.4 BOU, LOC_Os10g42299 solute transporter (MTCC) 0.05 OrthoFinder output from all 47 species
Mp7g07860.1 ATMBAC2, BAC2 solute transporter (MTCC) 0.03 OrthoFinder output from all 47 species
Pir_g65702 ATMBAC2, BAC2 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g01646 ATMBAC2, BAC2 solute transporter *(MTCC) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g066680.3.1 ATMBAC2, BAC2,... solute transporter (MTCC) 0.05 OrthoFinder output from all 47 species
Tin_g02475 ATMBAC2, BAC2 solute transporter *(MTCC) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009092 homoserine metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015267 channel activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0019346 transsulfuration IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0050667 homocysteine metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018108 Mitochondrial_sb/sol_carrier 11 104
IPR018108 Mitochondrial_sb/sol_carrier 117 209
IPR018108 Mitochondrial_sb/sol_carrier 221 310
No external refs found!