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  5. LOC_Os01g12260.1

LOC_Os01g12260.1 (TUFF, emb2448, TUF,...)


Aliases : TUFF, emb2448, TUF, VHA-E1, LOC_Os01g12260

Description : subunit E of V-type ATPase peripheral V1 subcomplex


Gene families : OG0002167 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002167_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g12260.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
Aob_g16226 VHA-E3 subunit E of V-type ATPase peripheral V1 subcomplex &... 0.03 OrthoFinder output from all 47 species
Aop_g01592 VHA-E3 subunit E of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020723.10 TUFF, emb2448,... Solute transport.primary active transport.V-type ATPase... 0.02 OrthoFinder output from all 47 species
Ppi_g20739 TUFF, emb2448,... subunit E of V-type ATPase peripheral V1 subcomplex &... 0.02 OrthoFinder output from all 47 species
Solyc08g008210.3.1 VHA-E3, Solyc08g008210 subunit E of V-type ATPase peripheral V1 subcomplex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEA Interproscan
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEA Interproscan
BP GO:1902600 proton transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR002842 ATPase_V1_Esu 17 225
No external refs found!