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  5. LOC_Os01g11040.1

LOC_Os01g11040.1 (WAVE4, ITB1, SCAR2,...)


Aliases : WAVE4, ITB1, SCAR2, ATSCAR2, DIS3, LOC_Os01g11040

Description : component SCAR of SCAR/WAVE ARP2/3-activating complex


Gene families : OG0001552 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g11040.1
Cluster HCCA: Cluster_76

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00061660 WAVE4, ITB1,... Cytoskeleton.microfilament network.actin... 0.05 OrthoFinder output from all 47 species
AT1G29170 WAVE2, SCAR3, ATSCAR3 SCAR family protein 0.02 OrthoFinder output from all 47 species
AT2G34150 WAVE1,... SCAR family protein 0.03 OrthoFinder output from all 47 species
Adi_g039709 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Aev_g38446 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
Aspi01Gene52314.t2 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
Ceric.12G082000.1 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.05 OrthoFinder output from all 47 species
Dde_g12837 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
Ehy_g06189 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01021213001 WAVE2, SCAR3, ATSCAR3 Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Lfl_g16281 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
Mp5g21730.1 WAVE4, ITB1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.02 OrthoFinder output from all 47 species
Msp_g43152 WAVE4, ITB1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g04459 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
Pir_g18320 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017408 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activating complex... 0.02 OrthoFinder output from all 47 species
Smo416077 WAVE4, ITB1,... Cytoskeleton.microfilament network.actin... 0.03 OrthoFinder output from all 47 species
Solyc02g076840.3.1 WAVE1,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.04 OrthoFinder output from all 47 species
Tin_g08437 WAVE4, ITB1,... component *(SCAR) of SCAR/WAVE ARP2/3-activaTing complex... 0.04 OrthoFinder output from all 47 species
Zm00001e026027_P001 WAVE2, SCAR3,... component SCAR of SCAR/WAVE ARP2/3-activating complex 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!