LOC_Os01g10630.1 (LOC_Os01g10630)


Aliases : LOC_Os01g10630

Description : no hits & (original description: none)


Gene families : OG0001673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001673_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g10630.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00170p00058310 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G48570 No alias zinc finger (Ran-binding) family protein 0.04 OrthoFinder output from all 47 species
AT1G53460 No alias BEST Arabidopsis thaliana protein match is: Ran BP2/NZF... 0.01 OrthoFinder output from all 47 species
AT1G55040 No alias zinc finger (Ran-binding) family protein 0.01 OrthoFinder output from all 47 species
Adi_g003867 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g007155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054823 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g065042 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g108029 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Adi_g111342 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g20942 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g11397 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19541 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g19944 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g15963 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12366 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60534.t1 Aspi01Gene60534 RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Azfi_s0014.g013544 No alias RNA editing factor *(OZ) & original description: CDS=1-2409 0.02 OrthoFinder output from all 47 species
Azfi_s0198.g057411 No alias RNA editing factor *(OZ) & original description: CDS=1-3054 0.02 OrthoFinder output from all 47 species
Azfi_s0661.g081440 No alias RNA editing factor *(OZ) & original description: CDS=90-3326 0.03 OrthoFinder output from all 47 species
Cba_g14180 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g25497 No alias RNA editing factor *(OZ) & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.03G001300.1 Ceric.03G001300 RNA editing factor *(OZ) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.26G046600.1 Ceric.26G046600 RNA editing factor *(OZ) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g11704 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g16799 No alias RNA editing factor *(OZ) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g31737 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36546 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g11382 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02287 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04668 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g18300 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g18431 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g18840 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01000088001 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
GSVIVT01008444001 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.11 OrthoFinder output from all 47 species
Gb_05351 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Gb_13912 No alias RNA editing factor (OZ-type) 0.06 OrthoFinder output from all 47 species
LOC_Os03g50120.1 LOC_Os03g50120 RNA editing factor (OZ-type) 0.01 OrthoFinder output from all 47 species
LOC_Os03g50430.1 LOC_Os03g50430 RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
LOC_Os07g22024.1 LOC_Os07g22024 RNA editing factor (OZ-type) 0.01 OrthoFinder output from all 47 species
Len_g48399 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06216 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g18415 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
MA_10434973g0010 No alias RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
MA_10436123g0010 No alias RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
MA_7499122g0010 No alias RNA editing factor (OZ-type) 0.07 OrthoFinder output from all 47 species
MA_854125g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g09059 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15706 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03681 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04568 No alias RNA editing factor *(OZ) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15553 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g00990 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55843 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002698 No alias calcium sensor *(CML) & original description: CDS=2182-4251 0.01 OrthoFinder output from all 47 species
Sam_g06378 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Sam_g07101 No alias RNA editing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species
Smo438605 No alias Zinc finger protein VAR3, chloroplastic OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc01g099230.3.1 Solyc01g099230 RNA editing factor (OZ-type) 0.03 OrthoFinder output from all 47 species
Solyc03g118680.3.1 Solyc03g118680 RNA editing factor (OZ-type) 0.02 OrthoFinder output from all 47 species
Solyc10g007440.3.1 Solyc10g007440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g11918 No alias RNA editing factor *(OZ) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20697 No alias RNA ediTing factor *(OZ) & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016742 hydroxymethyl-, formyl- and related transferase activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!