LOC_Os01g09890.1 (LOC_Os01g09890)

Aliases : LOC_Os01g09890

Description : no hits & (original description: none)

Gene families : OG0005545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005545_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g09890.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00025p00026830	evm_27.TU.AmTr_v1...	No description available	0.02	OrthoFinder output from all 47 species
Aop_g08101	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020904.56	No alias	No description available	0.01	OrthoFinder output from all 47 species
Lfl_g11400	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g08843	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Solyc07g039450.3.1	Solyc07g039450	no hits & (original description: none)	0.08	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003743	translation initiation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006413	translational initiation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
CC	GO:0005739	mitochondrion	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001950	SUI1	105	178

External Links

No external refs found!