LOC_Os01g09880.1 (LOC_Os01g09880)


Aliases : LOC_Os01g09880

Description : no hits & (original description: none)


Gene families : OG0000261 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000261_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g09880.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271680 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00214230 NHL10, YLS9,... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00215650 NHL3,... NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT1G08160 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT1G17620 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.09 OrthoFinder output from all 47 species
AT1G65690 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.11 OrthoFinder output from all 47 species
AT3G52460 No alias hydroxyproline-rich glycoprotein family protein 0.02 OrthoFinder output from all 47 species
AT5G22870 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Adi_g109010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g109011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g111045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g52160 NHL10, YLS9, ATNHL10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01602 NHL10, YLS9, ATNHL10 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene05231.t2 Aspi01Gene05231 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05267.t1 NHL10, YLS9,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07842.t1 NHL25, Aspi01Gene07842 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.11G017200.1 Ceric.11G017200 not classified & original description: pacid=50596641... 0.06 OrthoFinder output from all 47 species
Ceric.29G073800.1 Ceric.29G073800 not classified & original description: pacid=50625140... 0.04 OrthoFinder output from all 47 species
Ceric.39G045900.1 Ceric.39G045900 not classified & original description: pacid=50583407... 0.03 OrthoFinder output from all 47 species
Ehy_g02072 NHL10, YLS9, ATNHL10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g21432 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01033199001 No alias NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01037448001 No alias NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_01970 NHL25 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_13977 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_26588 No alias NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_41030 No alias no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
LOC_Os01g59680.1 LOC_Os01g59680 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g58090.1 LOC_Os04g58090 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os05g11010.1 LOC_Os05g11010 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Len_g20347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g19832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g21757 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_313447g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_5471g0010 No alias NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_83110g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Pir_g09290 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g009160.2.1 Solyc01g009160 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc02g036480.1.1 NHL25, Solyc02g036480 NDR1/HIN1-like protein 6 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g121620.1.1 Solyc03g121620 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g081980.2.1 NHL3, Solyc10g081980 NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc10g150145.1.1 NHL1, Solyc10g150145 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc11g069970.1.1 Solyc11g069970 no hits & (original description: none) 0.13 OrthoFinder output from all 47 species
Solyc12g095980.2.1 Solyc12g095980 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g11878 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Spa_g19173 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Spa_g30184 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e008171_P001 Zm00001e008171 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.15 OrthoFinder output from all 47 species
Zm00001e009221_P001 Zm00001e009221 NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e014749_P001 Zm00001e014749 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Zm00001e025983_P001 Zm00001e025983 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Zm00001e029112_P001 Zm00001e029112 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Zm00001e040847_P001 Zm00001e040847 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041974_P001 Zm00001e041974 NDR1/HIN1-like protein 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e041977_P001 Zm00001e041977 NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR004864 LEA_2 120 218
No external refs found!