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  5. LOC_Os01g08970.1

LOC_Os01g08970.1 (ATHMG, HMG, SSRP1,...)


Aliases : ATHMG, HMG, SSRP1, NFD, LOC_Os01g08970

Description : component SSRP of FACT histone chaperone complex


Gene families : OG0003187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003187_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: LOC_Os01g08970.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g024932 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Aob_g07382 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Azfi_s0032.g024680 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000076.93 ATHMG, HMG, SSRP1, NFD Chromatin organisation.histone chaperone activities.FACT... 0.01 OrthoFinder output from all 47 species
Dac_g22105 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g06083 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.02 OrthoFinder output from all 47 species
Spa_g46934 ATHMG, HMG, SSRP1, NFD component *(SSRP) of FACT histone chaperone complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e025981_P002 ATHMG, HMG,... component SSRP of FACT histone chaperone complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR013719 RTT106/SPT16-like_middle_dom 349 440
IPR009071 HMG_box_dom 556 623
IPR035417 SSRP1/POB3_N 7 97
IPR024954 SSRP1_DD 106 174
No external refs found!