LOC_Os01g64650.2


Description : YKT6-type R-type SNARE longin protein


Gene families : OG_01_0003416 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003416_tree ,
OG_02_0003992 (LandPlants) Phylogenetic Tree(s): OG_02_0003992_tree ,
OG_03_0005540 (SeedPlants) Phylogenetic Tree(s): OG_03_0005540_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g64650.2
Cluster HCCA: Cluster_347

Target Alias Description ECC score Gene Family Method Actions
AT5G58060 YKT61, ATGP1, ATYKT61 SNARE-like superfamily protein 0.04 Archaeplastida
Cpa|evm.model.tig00020554.58 No alias VAMP-like protein YKT61 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre17.g728150 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
GSVIVT01003730001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 Archaeplastida
Smo166326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
AT5G58060 YKT61, ATGP1, ATYKT61 SNARE-like superfamily protein 0.04 LandPlants
GSVIVT01003730001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 LandPlants
Smo166326 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 LandPlants
AT5G58060 YKT61, ATGP1, ATYKT61 SNARE-like superfamily protein 0.04 SeedPlants
GSVIVT01003730001 No alias Vesicle trafficking.SNARE target membrane recognition... 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010908 Longin_dom 60 128
IPR001388 Synaptobrevin 154 211
No external refs found!