LOC_Os01g08220.1 (GA4, GA3OX1,...)


Aliases : GA4, GA3OX1, ATGA3OX1, LOC_Os01g08220

Description : gibberellin 3-oxidase


Gene families : OG0003490 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003490_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08220.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT1G80330 ATGA3OX4, GA3OX4 gibberellin 3-oxidase 4 0.03 OrthoFinder output from all 47 species
AT4G21690 ATGA3OX3, GA3OX3 gibberellin 3-oxidase 3 0.03 OrthoFinder output from all 47 species
Adi_g086646 FLS1, ATFLS1, FLS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20000.t1 GA4, GA3OX1,... EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Cba_g25578 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.05 OrthoFinder output from all 47 species
Len_g38135 GA4, GA3OX1, ATGA3OX1 EC_1.14 oxidoreductase acting on paired donor with... 0.02 OrthoFinder output from all 47 species
Zm00001e016719_P001 GA4, GA3OX1,... gibberellin 3-oxidase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005123 Oxoglu/Fe-dep_dioxygenase 209 304
IPR026992 DIOX_N 48 148
No external refs found!