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  5. LOC_Os01g08160.1

LOC_Os01g08160.1 (LOC_Os01g08160)


Aliases : LOC_Os01g08160

Description : G2-like GARP transcription factor


Gene families : OG0001052 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001052_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g08160.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00127250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
AT1G13300 HRS1 myb-like transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT2G03500 No alias Homeodomain-like superfamily protein 0.1 OrthoFinder output from all 47 species
AT3G25790 No alias myb-like transcription factor family protein 0.04 OrthoFinder output from all 47 species
Adi_g019107 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ala_g23352 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Aob_g02230 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g22464 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g10990 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dcu_g18561 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g02562 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g16275 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003551001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01015462001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
Len_g48276 No alias GARP subgroup HHO transcription factor & original... 0.02 OrthoFinder output from all 47 species
Lfl_g03258 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Msp_g25323 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Nbi_g04274 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g14104 No alias GARP subgroup HHO transcription factor & original... 0.06 OrthoFinder output from all 47 species
Pnu_g31164 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc12g006800.2.1 Solyc12g006800 G2-like GARP transcription factor 0.07 OrthoFinder output from all 47 species
Spa_g55258 No alias GARP subgroup HHO transcription factor & original... 0.04 OrthoFinder output from all 47 species
Tin_g05185 No alias GARP subgroup HHO transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e003080_P001 Zm00001e003080 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e016724_P001 Zm00001e016724 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA

No InterPro domains available for this sequence

No external refs found!