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  5. LOC_Os01g07810.1

LOC_Os01g07810.1 (LOC_Os01g07810)


Aliases : LOC_Os01g07810

Description : R-loop reader protein (ALBA1/2)


Gene families : OG0001187 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07810.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00132470 evm_27.TU.AmTr_v1... Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Adi_g080251 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.20G014500.1 Ceric.20G014500 R-loop reader protein *(ALBA1/2) & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g31147 No alias R-loop reader protein *(ALBA1/2) & original description: none 0.06 OrthoFinder output from all 47 species
Mp6g20280.1 No alias R-loop reader protein (ALBA1/2) 0.06 OrthoFinder output from all 47 species
Smo86023 No alias Uncharacterized protein At2g34160 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005743 mitochondrial inner membrane IEP HCCA
CC GO:0019866 organelle inner membrane IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0061617 MICOS complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR002775 DNA/RNA-bd_Alba-like 43 102
No external refs found!