1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os01g07140.1

LOC_Os01g07140.1 (LOC_Os01g07140)


Aliases : LOC_Os01g07140

Description : B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 121.0)


Gene families : OG0000085 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000085_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g07140.1
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AT2G35140 No alias DCD (Development and Cell Death) domain protein 0.04 OrthoFinder output from all 47 species
AT3G11000 No alias DCD (Development and Cell Death) domain protein 0.03 OrthoFinder output from all 47 species
Aob_g07809 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g11700 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z051200.1 Ceric.1Z051200 not classified & original description: pacid=50617037... 0.05 OrthoFinder output from all 47 species
Dde_g07677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_16287 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 93.2) 0.02 OrthoFinder output from all 47 species
Gb_18799 No alias B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 270.0) 0.05 OrthoFinder output from all 47 species
MA_26274g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g23790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc10g076330.3.1 Solyc10g076330 B2 protein OS=Daucus carota (sp|p37707|b2_dauca : 118.0) 0.03 OrthoFinder output from all 47 species
Spa_g06577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
InterPro domains Description Start Stop
IPR006652 Kelch_1 514 548
IPR006652 Kelch_1 556 598
IPR006652 Kelch_1 460 506
IPR006652 Kelch_1 600 645
IPR013989 Dev_and_cell_death_domain 29 166
No external refs found!