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  5. LOC_Os01g05840.2

LOC_Os01g05840.2 (LOC_Os01g05840)


Aliases : LOC_Os01g05840

Description : Short-chain dehydrogenase TIC 32, chloroplastic OS=Arabidopsis thaliana (sp|a2rvm0|tic32_arath : 308.0)


Gene families : OG0000190 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g05840.2

Target Alias Description ECC score Gene Family Method Actions
Aev_g37903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33954.t1 Aspi01Gene33954 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56848.t1 Aspi01Gene56848 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0310.g064122 No alias not classified & original description: CDS=91-1152 0.03 OrthoFinder output from all 47 species
Azfi_s0310.g064128 No alias not classified & original description: CDS=310-1077 0.03 OrthoFinder output from all 47 species
Ceric.11G038900.1 Ceric.11G038900 not classified & original description: pacid=50595966... 0.03 OrthoFinder output from all 47 species
Ceric.33G014400.1 Ceric.33G014400 not classified & original description: pacid=50607635... 0.04 OrthoFinder output from all 47 species
Dac_g23692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019741001 No alias Protein translocation.chloroplast.inner envelope TIC... 0.03 OrthoFinder output from all 47 species
MA_10432182g0010 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.05 OrthoFinder output from all 47 species
Msp_g31463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g40152 No alias component *(Tic32) of inner envelope TIC translocation... 0.02 OrthoFinder output from all 47 species
Ore_g30389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37039 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c17_8260V3.1 Pp3c17_8260 NAD(P)-binding Rossmann-fold superfamily protein 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012608 No alias not classified & original description: CDS=342-1457 0.02 OrthoFinder output from all 47 species
Sam_g48884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo420551 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
Smo439201 No alias Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum sativum 0.04 OrthoFinder output from all 47 species
Smo85319 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.03 OrthoFinder output from all 47 species
Smo85541 No alias Short-chain dehydrogenase TIC 32, chloroplastic... 0.05 OrthoFinder output from all 47 species
Solyc08g081200.3.1 Solyc08g081200 component Tic32 of inner envelope TIC translocation system 0.03 OrthoFinder output from all 47 species
Solyc09g010510.4.1 Solyc09g010510 Short-chain dehydrogenase TIC 32, chloroplastic OS=Pisum... 0.03 OrthoFinder output from all 47 species
Spa_g45040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g46897 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002347 SDR_fam 35 183
No external refs found!