LOC_Os01g05070.1 (LOC_Os01g05070)


Aliases : LOC_Os01g05070

Description : methyltransferase (CGR)


Gene families : OG0003308 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003308_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g05070.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00137p00066590 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.02 OrthoFinder output from all 47 species
AT5G65810 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Aev_g13188 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g21982 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01313 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03748 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0043.g026971 No alias methyltransferase *(CGR) & original description: CDS=1174-1419 0.03 OrthoFinder output from all 47 species
Cba_g11074 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.21G072000.1 Ceric.21G072000 methyltransferase *(CGR) & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g08659 No alias methyltransferase *(CGR) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11903 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g29082 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02321 No alias methyltransferase *(CGR) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12645 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01002452001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01002531001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01009285001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.03 OrthoFinder output from all 47 species
GSVIVT01036990001 No alias Cell wall.pectin.homogalacturonan.synthesis.CGR-type... 0.05 OrthoFinder output from all 47 species
Lfl_g38069 No alias methyltransferase *(CGR) & original description: none 0.08 OrthoFinder output from all 47 species
MA_24468g0010 No alias methyltransferase (CGR) 0.04 OrthoFinder output from all 47 species
Mp2g15640.1 No alias methyltransferase (CGR) 0.02 OrthoFinder output from all 47 species
Msp_g38644 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43608 No alias methyltransferase *(CGR) & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05028 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Solyc02g092000.3.1 Solyc02g092000 methyltransferase (CGR) 0.03 OrthoFinder output from all 47 species
Spa_g05912 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g29968 No alias methyltransferase *(CGR) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g37902 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14174 No alias methyltransferase *(CGR) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025797_P004 Zm00001e025797 methyltransferase (CGR) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
MF GO:0015098 molybdate ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015689 molybdate ion transport IEP HCCA
BP GO:0015698 inorganic anion transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA

No InterPro domains available for this sequence

No external refs found!