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  5. LOC_Os01g04930.1

LOC_Os01g04930.1 (LOC_Os01g04930)


Aliases : LOC_Os01g04930

Description : transcription factor (MYB-related)


Gene families : OG0000160 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g04930.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00022290 evm_27.TU.AmTr_v1... Transcription factor SRM1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00215750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT1G74840 No alias Homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G38090 No alias Duplicated homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G47390 No alias myb-like transcription factor family protein 0.06 OrthoFinder output from all 47 species
Adi_g013787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021554 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Adi_g075107 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Aev_g24499 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Aev_g24500 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ala_g12426 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Als_g48089 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Als_g49186 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Als_g61095 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aop_g13795 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Aspi01Gene05859.t1 Aspi01Gene05859 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17159.t1 Aspi01Gene17159 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene17162.t1 Aspi01Gene17162 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g29990 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Cba_g60011 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Cba_g68518 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ceric.14G074800.1 Ceric.14G074800 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ceric.30G065000.1 Ceric.30G065000 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Ceric.34G025300.1 Ceric.34G025300 MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Dac_g03644 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03626 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g08181 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g12105 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Ehy_g23595 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01007843001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01013684001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
LOC_Os05g10690.1 LOC_Os05g10690 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
LOC_Os05g37730.1 LOC_Os05g37730 transcription factor (MYB-related) 0.06 OrthoFinder output from all 47 species
Lfl_g03042 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
MA_40234g0010 No alias transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
MA_41803g0010 No alias transcription factor (MYB-related) 0.02 OrthoFinder output from all 47 species
MA_79012g0010 No alias transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Msp_g03909 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g13751 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g23525 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.05 OrthoFinder output from all 47 species
Pir_g27107 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Pir_g63199 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g31676 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014792 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020234 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0538.g027475 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Smo439294 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
Solyc04g008870.3.1 Solyc04g008870 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Solyc09g014250.3.1 Solyc09g014250 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Spa_g06188 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.02 OrthoFinder output from all 47 species
Spa_g25282 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.04 OrthoFinder output from all 47 species
Spa_g49345 No alias MYB-RELATED transcription factor *(MYB-R-R) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e016939_P001 Zm00001e016939 transcription factor (MYB-related) 0.03 OrthoFinder output from all 47 species
Zm00001e019254_P001 Zm00001e019254 transcription factor (MYB-related) 0.05 OrthoFinder output from all 47 species
Zm00001e025784_P001 Zm00001e025784 transcription factor (MYB-related) 0.06 OrthoFinder output from all 47 species
Zm00001e027835_P005 Zm00001e027835 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species
Zm00001e031738_P001 Zm00001e031738 transcription factor (MYB-related) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 28 73
IPR001005 SANT/Myb 141 185
No external refs found!