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LOC_Os01g04620.1 (LOC_Os01g04620)


Aliases : LOC_Os01g04620

Description : Putative glutamine amidotransferase GAT1_2.1 OS=Arabidopsis thaliana (sp|q8h0z4|gt121_arath : 447.0)


Gene families : OG0004449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g04620.1
Cluster HCCA: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
AT1G66860 No alias Class I glutamine amidotransferase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G38200 No alias Class I glutamine amidotransferase-like superfamily protein 0.04 OrthoFinder output from all 47 species
Aev_g10532 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15992 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene13133.t1 Aspi01Gene13133 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66603.t1 Aspi01Gene66603 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g07214 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011847001 No alias Putative glutamine amidotransferase GAT1_2.1... 0.03 OrthoFinder output from all 47 species
GSVIVT01030990001 No alias Putative glutamine amidotransferase GAT1_2.1... 0.04 OrthoFinder output from all 47 species
MA_803797g0010 No alias Putative glutamine amidotransferase GAT1_2.1... 0.02 OrthoFinder output from all 47 species
Nbi_g17712 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g30904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38867 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo170418 No alias Putative glutamine amidotransferase GAT1_2.1... 0.02 OrthoFinder output from all 47 species
Spa_g24739 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e003780_P001 Zm00001e003780 Putative glutamine amidotransferase GAT1_2.1... 0.01 OrthoFinder output from all 47 species
Zm00001e025767_P001 Zm00001e025767 Putative glutamine amidotransferase GAT1_2.1... 0.1 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
InterPro domains Description Start Stop
IPR011697 Peptidase_C26 30 255
No external refs found!