LOC_Os01g03730.1 (ENDO 2, LOC_Os01g03730)

Aliases : ENDO 2, LOC_Os01g03730

Description : Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase acting on ester bond(50.3.1 : 420.3) & Endonuclease 4 OS=Arabidopsis thaliana (sp|f4jjl0|endo4_arath : 343.0)

Gene families : OG0001546 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001546_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g03730.1

Target	Alias	Description	ECC score	Gene Family Method
AT1G11190	BFN1, ENDO1	bifunctional nuclease i	0.07	OrthoFinder output from all 47 species
AT4G21600	ENDO5	endonuclease 5	0.03	OrthoFinder output from all 47 species
Dcu_g14384	ENDO 2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Ehy_g16169	ENDO 2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Mp4g07120.1	ENDO4	Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase...	0.03	OrthoFinder output from all 47 species
Ore_g05848	ENDO 2	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Sam_g26785	No alias	EC_3.1 hydrolase acting on ester bond & original...	0.02	OrthoFinder output from all 47 species
Tin_g02432	ENDO 2	EC_3.1 hydrolase acTing on ester bond & original...	0.02	OrthoFinder output from all 47 species
Zm00001e004395_P002	BFN1, ENDO1,...	Endonuclease 1 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Zm00001e025725_P001	ENDO 2, Zm00001e025725	Enzyme classification.EC_3 hydrolases.EC_3.1 hydrolase...	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006308	DNA catabolic process	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0016636	oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor	IEP	HCCA
MF	GO:0051743	red chlorophyll catabolite reductase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003154	S1/P1nuclease	34	293

External Links

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LOC_Os01g03730.1 (ENDO 2, LOC_Os01g03730)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation