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LOC_Os01g01420.2 (LOC_Os01g01420)


Aliases : LOC_Os01g01420

Description : Protein NCA1 OS=Arabidopsis thaliana (sp|q9m2v1|nca1_arath : 417.0)


Gene families : OG0007063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01420.2
Cluster HCCA: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001155.24 No alias Protein NCA1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Dde_g10089 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027370001 No alias Protein NCA1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Lfl_g12380 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10143 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 228 255
No external refs found!