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  5. LOC_Os01g01170.1

LOC_Os01g01170.1 (LOC_Os01g01170)


Aliases : LOC_Os01g01170

Description : no hits & (original description: none)


Gene families : OG0004380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g01170.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00248170 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT3G23740 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
Als_g08326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G010200.1 Ceric.07G010200 not classified & original description: pacid=50627972... 0.04 OrthoFinder output from all 47 species
GSVIVT01009690001 No alias No description available 0.09 OrthoFinder output from all 47 species
GSVIVT01031579001 No alias No description available 0.11 OrthoFinder output from all 47 species
Gb_19139 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_25851 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Len_g16322 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_124485g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_45158g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp1g04690.1 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Sam_g10034 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g080200.4.1 Solyc04g080200 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Solyc09g092510.3.1 Solyc09g092510 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e002120_P003 Zm00001e002120 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e017187_P001 Zm00001e017187 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e025613_P002 Zm00001e025613 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Zm00001e039147_P001 Zm00001e039147 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0031390 Ctf18 RFC-like complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA

No InterPro domains available for this sequence

No external refs found!