ChrUn.fgenesh.mRNA.51 (ORF158)


Aliases : ORF158

Description : RNA-directed DNA polymerase homolog OS=Oenothera berteroana (sp|p31843|rrpo_oenbe : 140.0)


Gene families : OG0000001 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrUn.fgenesh.mRNA.51
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Adi_g062802 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085112 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g108409 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09482 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g09527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g10410 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13671 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g18575 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g24358 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g29117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g29824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g30204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30791 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g32465 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34958 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g35563 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g38071 ORF107E not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39631 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42498 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42535 ORF158 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g42919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g43087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44708 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44899 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g47013 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48388 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g48511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g39458 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g18243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g51383 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g58259 ORF107E not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00858.t3 Aspi01Gene00858 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01268.t1 Aspi01Gene01268 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene03488.t1 ORF107E, Aspi01Gene03488 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene04665.t1 Aspi01Gene04665 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04819.t1 Aspi01Gene04819 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05948.t1 Aspi01Gene05948 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05953.t1 Aspi01Gene05953 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08175.t1 Aspi01Gene08175 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09734.t1 Aspi01Gene09734 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10801.t1 Aspi01Gene10801 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11894.t1 Aspi01Gene11894 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13386.t1 Aspi01Gene13386 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15061.t1 ORF158, Aspi01Gene15061 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15081.t1 Aspi01Gene15081 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15416.t1 Aspi01Gene15416 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene19765.t1 AAE14, Aspi01Gene19765 2-succinylbenzoate:CoA ligase *(MenE) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene19794.t1 Aspi01Gene19794 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21467.t1 Aspi01Gene21467 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene21570.t1 ORF158, Aspi01Gene21570 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23037.t1 ORF158, Aspi01Gene23037 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23614.t1 ORF158, Aspi01Gene23614 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32616.t1 Aspi01Gene32616 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33064.t1 Aspi01Gene33064 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34994.t1 Aspi01Gene34994 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37750.t1 Aspi01Gene37750 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37751.t1 Aspi01Gene37751 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40382.t1 Aspi01Gene40382 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene42825.t1 ORF158, Aspi01Gene42825 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45666.t1 Aspi01Gene45666 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53210.t1 Aspi01Gene53210 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55632.t1 Aspi01Gene55632 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene56686.t1 ORF107E, Aspi01Gene56686 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58737.t1 Aspi01Gene58737 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene59708.t1 ORF158, Aspi01Gene59708 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60385.t1 ORF107E, Aspi01Gene60385 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63390.t1 Aspi01Gene63390 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66302.t1 ORF107E, Aspi01Gene66302 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67789.t1 Aspi01Gene67789 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68034.t1 ORF158, Aspi01Gene68034 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69334.t1 Aspi01Gene69334 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene70181.t1 ORF158, Aspi01Gene70181 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71830.t1 ORF158, Aspi01Gene71830 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05238 ORF158 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12964 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17806 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g23114 ORF107E not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24250 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29104 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.48 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.13 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.57 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
ChrSy.fgenesh.mRNA.60 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.11 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.5 No alias no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.52 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 OrthoFinder output from all 47 species
Cre01.g006402 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g13531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g35759 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g37398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_07126 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_14366 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 OrthoFinder output from all 47 species
Gb_16314 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_18721 ORF158 RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 OrthoFinder output from all 47 species
Gb_25344 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
Gb_25450 ORF158 Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
Gb_26368 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_30262 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_39777 No alias Uncharacterized mitochondrial protein AtMg00860... 0.03 OrthoFinder output from all 47 species
LOC_Os12g32499.1 LOC_Os12g32499 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g10169 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g16083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g41339 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g16459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g20170 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47746 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g61256 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21805 ORF158 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041373 RT_RNaseH 1124 1223
IPR041588 Integrase_H2C2 1334 1390
IPR005162 Retrotrans_gag_dom 400 497
IPR001584 Integrase_cat-core 1414 1521
IPR001878 Znf_CCHC 608 624
IPR000477 RT_dom 877 1035
No external refs found!