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  5. ChrUn.fgenesh.mRNA.42

ChrUn.fgenesh.mRNA.42


Description : no hits & (original description: none)


Gene families : OG0000189 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000189_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: ChrUn.fgenesh.mRNA.42
Cluster HCCA: Cluster_5

Target Alias Description ECC score Gene Family Method Actions
Aev_g33653 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g15471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene04035.t1 Aspi01Gene04035 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene08310.t1 Aspi01Gene08310 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene11395.t1 Aspi01Gene11395 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene11621.t1 Aspi01Gene11621 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25213.t1 Aspi01Gene25213 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27942.t1 Aspi01Gene27942 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29090.t1 Aspi01Gene29090 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30601.t1 Aspi01Gene30601 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36135.t1 Aspi01Gene36135 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47757.t1 GLP10, Aspi01Gene47757 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51914.t1 Aspi01Gene51914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene62508.t1 Aspi01Gene62508 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63444.t1 Aspi01Gene63444 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene71660.t1 Aspi01Gene71660 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g21596 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21821 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.45 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
ChrUn.fgenesh.mRNA.46 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os06g32740.1 SCPL15, LOC_Os06g32740 serine carboxypeptidase 0.18 OrthoFinder output from all 47 species
Len_g56013 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g19531 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28172 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g32326 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025312 DUF4216 630 695
IPR025452 DUF4218 414 520
IPR004242 Transposase_21 33 240
No external refs found!