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  5. MA_99491g0010

MA_99491g0010 (PUB44, SAUL1, ATPUB44)


Aliases : PUB44, SAUL1, ATPUB44

Description : E3 ubiquitin ligase (PUB)


Gene families : OG0001077 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_99491g0010

Target Alias Description ECC score Gene Family Method Actions
Aop_g07785 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045660 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=666-3779 0.03 OrthoFinder output from all 47 species
Cba_g13723 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.03G046500.1 PUB44, SAUL1,... E3 ubiquitin ligase *(SAUL) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10711 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01010123001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
LOC_Os12g17880.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
LOC_Os12g17900.1 PUB44, SAUL1,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005833 No alias not classified & original description: CDS=1-537 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023040 PUB44, SAUL1, ATPUB44 E3 ubiquitin ligase *(SAUL) & original description: CDS=347-3472 0.03 OrthoFinder output from all 47 species
Zm00001e023438_P004 Zm00001e023438 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008289 lipid binding IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 206 237
No external refs found!