LOC_Os07g46590 (Os07g0660200)


Aliases : Os07g0660200

Description : 28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)


Gene families : OG_01_0000140 (Gene family) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os07g46590
Cluster HCCA cluster: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
AT1G08060 MOM1, MOM ATP-dependent helicase family protein 0.01 Gene family
AT3G06010 ATCHR12 Homeotic gene regulator 0.02 Gene family
Cpa|evm.model.tig00000217.25 No alias 28.1 DNA.synthesis/chromatin structure Encodes a... 0.01 Gene family
Cpa|evm.model.tig00000802.67 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.03 Gene family
Cpa|evm.model.tig00000983.26 No alias 28.1 DNA.synthesis/chromatin structure chromatin... 0.02 Gene family
Cre12.g508150 No alias 27.3.44 RNA.regulation of transcription.Chromatin... 0.01 Gene family
GSVIVT01017820001 No alias 28.1 DNA.synthesis/chromatin structure Encodes a... 0.01 Gene family
GSVIVT01037235001 No alias 28.1 DNA.synthesis/chromatin structure chromatin... 0.02 Gene family
MA_8926002g0010 No alias 28.1 DNA.synthesis/chromatin structure Encodes a... 0.02 Gene family
Smo155996 PACid_15410236 No description available 0.01 Gene family
Smo440203 PACid_15403255 27.3.44 RNA.regulation of transcription.Chromatin... 0.01 Gene family
Smo440815 PACid_15407851 28.1 DNA.synthesis/chromatin structure chromatin... 0.01 Gene family
Solyc11g062010.2.1 Solyc11g062010.2 28.1 DNA.synthesis/chromatin structure Encodes a... 0.01 Gene family
Solyc12g099910.2.1 Solyc12g099910.2 28.1 DNA.synthesis/chromatin structure chromatin... 0.03 Gene family
Zm00001d021541 GRMZM2G316191 28.1 DNA.synthesis/chromatin structure chromatin... 0.01 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR015195 SLIDE 594 656
IPR000330 SNF2_N 2 156
IPR025260 DUF4208 774 866
IPR001650 Helicase_C 185 297
No external refs found!