LOC_Os07g46590 (Os07g0660200)

Aliases : Os07g0660200

Description : 28.1 DNA.synthesis/chromatin structure chromatin remodeling 5 (CHR5)

Gene families : OG_01_0000140 (Gene family) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR network (cutoff 100): LOC_Os07g46590
Cluster	HCCA cluster: Cluster_189

Target	Alias	Description	ECC score	Gene Family Method
AT1G08060	MOM1, MOM	ATP-dependent helicase family protein	0.01	Gene family
AT3G06010	ATCHR12	Homeotic gene regulator	0.02	Gene family
Cpa\|evm.model.tig00000217.25	No alias	28.1 DNA.synthesis/chromatin structure Encodes a...	0.01	Gene family
Cpa\|evm.model.tig00000802.67	No alias	27.3.44 RNA.regulation of transcription.Chromatin...	0.03	Gene family
Cpa\|evm.model.tig00000983.26	No alias	28.1 DNA.synthesis/chromatin structure chromatin...	0.02	Gene family
Cre12.g508150	No alias	27.3.44 RNA.regulation of transcription.Chromatin...	0.01	Gene family
GSVIVT01017820001	No alias	28.1 DNA.synthesis/chromatin structure Encodes a...	0.01	Gene family
GSVIVT01037235001	No alias	28.1 DNA.synthesis/chromatin structure chromatin...	0.02	Gene family
MA_8926002g0010	No alias	28.1 DNA.synthesis/chromatin structure Encodes a...	0.02	Gene family
Smo155996	PACid_15410236	No description available	0.01	Gene family
Smo440203	PACid_15403255	27.3.44 RNA.regulation of transcription.Chromatin...	0.01	Gene family
Smo440815	PACid_15407851	28.1 DNA.synthesis/chromatin structure chromatin...	0.01	Gene family
Solyc11g062010.2.1	Solyc11g062010.2	28.1 DNA.synthesis/chromatin structure Encodes a...	0.01	Gene family
Solyc12g099910.2.1	Solyc12g099910.2	28.1 DNA.synthesis/chromatin structure chromatin...	0.03	Gene family
Zm00001d021541	GRMZM2G316191	28.1 DNA.synthesis/chromatin structure chromatin...	0.01	Gene family

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan
MF	GO:0008144	drug binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR015195	SLIDE	594	656
IPR000330	SNF2_N	2	156
IPR025260	DUF4208	774	866
IPR001650	Helicase_C	185	297

External Links

No external refs found!