LOC_Os01g62440.1


Description : exoribonuclease (RNase R)


Gene families : OG_01_0005570 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005570_tree ,
OG_02_0007028 (LandPlants) Phylogenetic Tree(s): OG_02_0007028_tree ,
OG_03_0009663 (SeedPlants) Phylogenetic Tree(s): OG_03_0009663_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g62440.1
Cluster HCCA: Cluster_311

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01034161001 No alias RNA processing.organelle machineries.ribonuclease... 0.05 Archaeplastida
Gb_33852 No alias exoribonuclease (RNase R) 0.05 Archaeplastida
Gb_33853 No alias exoribonuclease (RNase R) 0.05 Archaeplastida
MA_10437077g0010 No alias exoribonuclease (RNase R) 0.02 Archaeplastida
Mp3g07060.1 No alias exoribonuclease (RNase R) 0.03 Archaeplastida
Solyc09g010870.4.1 No alias exoribonuclease (RNase R) 0.03 Archaeplastida
Zm00001e019318_P002 No alias exoribonuclease (RNase R) 0.03 Archaeplastida
GSVIVT01034161001 No alias RNA processing.organelle machineries.ribonuclease... 0.06 LandPlants
Gb_33853 No alias exoribonuclease (RNase R) 0.04 LandPlants
Mp3g07060.1 No alias exoribonuclease (RNase R) 0.02 LandPlants
Pp3c14_20610V3.1 No alias Ribonuclease II/R family protein 0.01 LandPlants
Smo145357 No alias RNA processing.organelle machineries.ribonuclease... 0.01 LandPlants
Solyc09g010870.4.1 No alias exoribonuclease (RNase R) 0.03 LandPlants
Zm00001e019318_P002 No alias exoribonuclease (RNase R) 0.03 LandPlants
GSVIVT01034161001 No alias RNA processing.organelle machineries.ribonuclease... 0.04 SeedPlants
Gb_33853 No alias exoribonuclease (RNase R) 0.04 SeedPlants
Solyc09g010870.4.1 No alias exoribonuclease (RNase R) 0.02 SeedPlants
Zm00001e019318_P002 No alias exoribonuclease (RNase R) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0004540 ribonuclease activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001900 RNase_II/R 375 670
No external refs found!