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  5. MA_97686g0010

MA_97686g0010 (SCC2, ATSCC2, EMB2773)


Aliases : SCC2, ATSCC2, EMB2773

Description : adherin (SCC2)


Gene families : OG0005074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_97686g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00110p00053630 SCC2, ATSCC2,... Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
AT5G15540 SCC2, ATSCC2, EMB2773 PHD finger family protein 0.02 OrthoFinder output from all 47 species
Ala_g16239 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15027.t1 SCC2, ATSCC2,... adherin *(SCC2) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G000800.1 SCC2, ATSCC2,... adherin *(SCC2) & original description: pacid=50634323... 0.02 OrthoFinder output from all 47 species
Cre06.g278266 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g39401 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28888 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06506 SCC2, ATSCC2, EMB2773 adherin *(SCC2) & original description: none 0.05 OrthoFinder output from all 47 species
Smo440913 SCC2, ATSCC2, EMB2773 Cell cycle.mitosis and meiosis.sister chromatid... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006366 transcription by RNA polymerase II IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR024986 Nipped-B_C 223 412
No external refs found!