Aliases : LBD29, ASL16
Description : transcription factor (AS2/LOB)
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_97411g0010 | |
Cluster | HCCA: Cluster_48 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00241970 | LBD27, SCP,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00041p00044170 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.01 | OrthoFinder output from all 47 species | |
AT2G31310 | LBD14 | LOB domain-containing protein 14 | 0.03 | OrthoFinder output from all 47 species | |
AT2G45420 | LBD18 | LOB domain-containing protein 18 | 0.02 | OrthoFinder output from all 47 species | |
AT4G00220 | LBD30, JLO | Lateral organ boundaries (LOB) domain family protein | 0.04 | OrthoFinder output from all 47 species | |
Als_g10153 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aop_g64401 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0225.g058902 | LBD4 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0305.g063899 | LBD15, ASL11 | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Cba_g02965 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G060200.1 | LBD15, ASL11,... | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g12391 | LBD25 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01016332001 | LBD11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01032592001 | LBD27, SCP | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
Gb_11325 | LBD4 | transcription factor (AS2/LOB) | 0.01 | OrthoFinder output from all 47 species | |
Gb_14010 | LBD20 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_16914 | LBD1 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_29853 | LBD4 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_38978 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Gb_39343 | LBD20 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g07270.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os05g27980.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Len_g10227 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Len_g16017 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g37300 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10430986g0010 | LBD15, ASL11 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
MA_290245g0010 | AS2 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
MA_88711g0010 | LBD25 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
MA_962403g0010 | LBD19 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Mp7g00650.1 | ASL1, LBD36 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Ore_g42913 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pir_g43000 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g22342 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g24707 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g086480.1.1 | LOB, Solyc02g086480 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g095940.1.1 | LBD21, Solyc03g095940 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Solyc06g082310.3.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
Solyc06g082430.2.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Solyc09g066270.3.1 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g40992 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g12549 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000390_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e000391_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001031_P001 | LBD18, Zm00001e001031 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e019686_P001 | LBD20, Zm00001e019686 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e026736_P001 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030195_P001 | LBD2, Zm00001e030195 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e038582_P001 | LBD18, Zm00001e038582 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042347_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e042443_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e042444_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e042448_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR004883 | LOB | 7 | 103 |
No external refs found! |