LOC_Os01g61480.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g61480.1
Cluster HCCA: Cluster_319

Target Alias Description ECC score Gene Family Method Actions
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 Archaeplastida
AT1G68240 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.03 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
AT5G01305 No alias No description available 0.07 Archaeplastida
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_30839 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_88831g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.04 Archaeplastida
Smo405220 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
Solyc03g044460.1.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.1 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00008p00265010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.02 LandPlants
AT1G68240 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
AT5G01305 No alias No description available 0.06 LandPlants
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.03 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
Gb_06182 No alias transcription factor (bHLH) 0.01 LandPlants
Gb_27869 No alias transcription factor (bHLH) 0.04 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.03 LandPlants
MA_88831g0010 No alias transcription factor (bHLH) 0.03 LandPlants
Pp3c10_19020V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 LandPlants
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 LandPlants
Solyc02g090950.1.1 No alias transcription factor (bHLH) 0.01 LandPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.08 LandPlants
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.02 LandPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.01 LandPlants
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.1 LandPlants
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.06 LandPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.04 LandPlants
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.01 SeedPlants
AT1G68240 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 SeedPlants
AT5G01305 No alias No description available 0.06 SeedPlants
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
Gb_27869 No alias transcription factor (bHLH) 0.02 SeedPlants
Gb_30839 No alias transcription factor (bHLH) 0.01 SeedPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc02g093280.2.1 No alias transcription factor (bHLH) 0.07 SeedPlants
Solyc12g088790.3.1 No alias transcription factor (bHLH) 0.01 SeedPlants
Zm00001e016160_P003 No alias transcription factor (bHLH) 0.01 SeedPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.1 SeedPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.06 SeedPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 50 89
No external refs found!