LOC_Os01g60770.1


Description : alpha-class expansin


Gene families : OG_01_0000024 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000024_tree ,
OG_02_0000028 (LandPlants) Phylogenetic Tree(s): OG_02_0000028_tree ,
OG_03_0000041 (SeedPlants) Phylogenetic Tree(s): OG_03_0000041_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g60770.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 Archaeplastida
AMTR_s00110p00103570 evm_27.TU.AmTr_v1... Expansin-A4 OS=Arabidopsis thaliana 0.04 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT1G62980 EXPA18, EXP18,... expansin A18 0.03 Archaeplastida
AT1G69530 ATEXPA1, EXP1,... expansin A1 0.05 Archaeplastida
AT2G37640 ATEXPA3, EXP3,... Barwin-like endoglucanases superfamily protein 0.03 Archaeplastida
AT4G01630 ATHEXP ALPHA... expansin A17 0.02 Archaeplastida
AT5G02260 EXP9, EXPA9,... expansin A9 0.03 Archaeplastida
AT5G39280 ATHEXP ALPHA ... expansin A23 0.03 Archaeplastida
AT5G39300 ATEXPA25,... expansin A25 0.02 Archaeplastida
GSVIVT01008762001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
GSVIVT01014362001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Gb_01499 No alias alpha-class expansin 0.04 Archaeplastida
Gb_09118 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os01g14660.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g06050.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os03g31480.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os06g01920.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g30330.1 No alias alpha-class expansin 0.04 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os10g39110.1 No alias alpha-class expansin 0.03 Archaeplastida
MA_100868g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_104065g0020 No alias alpha-class expansin 0.03 Archaeplastida
MA_10425823g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_130258g0010 No alias alpha-class expansin 0.04 Archaeplastida
MA_14588g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_18265g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_274624g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_275115g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_37884g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_45587g0020 No alias alpha-class expansin 0.02 Archaeplastida
MA_4979g0010 No alias alpha-class expansin 0.03 Archaeplastida
MA_70880g0010 No alias alpha-class expansin 0.02 Archaeplastida
MA_7218g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_91602g0010 No alias Expansin-A2 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp1g22700.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp1g22730.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g24230.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp1g26350.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp2g18600.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp2g18610.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp3g09750.1 No alias alpha-class expansin 0.05 Archaeplastida
Mp3g09760.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g09770.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp3g24470.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.04 Archaeplastida
Mp5g20420.1 No alias alpha-class expansin 0.03 Archaeplastida
Mp8g18860.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c11_12000V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c12_4560V3.1 No alias expansin A9 0.04 Archaeplastida
Pp3c18_19660V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c21_1850V3.1 No alias expansin A1 0.02 Archaeplastida
Pp3c21_1940V3.1 No alias expansin A9 0.03 Archaeplastida
Pp3c7_12870V3.1 No alias expansin A14 0.02 Archaeplastida
Pp3c8_14900V3.1 No alias expansin A14 0.03 Archaeplastida
Pp3c8_870V3.1 No alias expansin A1 0.02 Archaeplastida
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Smo236978 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.07 Archaeplastida
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
Smo90935 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
Solyc03g115345.1.1 No alias alpha-class expansin 0.04 Archaeplastida
Solyc05g052250.3.1 No alias alpha-class expansin 0.02 Archaeplastida
Solyc07g063210.3.1 No alias alpha-class expansin 0.06 Archaeplastida
Solyc08g007780.3.1 No alias Putative expansin-A30 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Solyc08g080060.4.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc10g084780.3.1 No alias alpha-class expansin 0.03 Archaeplastida
Solyc12g089380.2.1 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e000429_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004714_P001 No alias alpha-class expansin 0.05 Archaeplastida
Zm00001e004719_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e004721_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e011741_P001 No alias alpha-class expansin 0.03 Archaeplastida
Zm00001e014231_P001 No alias Expansin-A13 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e019433_P001 No alias alpha-class expansin 0.2 Archaeplastida
Zm00001e036693_P001 No alias alpha-class expansin 0.04 Archaeplastida
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 LandPlants
AMTR_s00012p00230920 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 LandPlants
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 LandPlants
Gb_01499 No alias alpha-class expansin 0.02 LandPlants
Gb_09118 No alias alpha-class expansin 0.05 LandPlants
Gb_20678 No alias alpha-class expansin 0.02 LandPlants
LOC_Os01g14660.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g06050.1 No alias alpha-class expansin 0.05 LandPlants
LOC_Os03g21820.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os03g31480.1 No alias alpha-class expansin 0.05 LandPlants
LOC_Os10g30330.1 No alias alpha-class expansin 0.04 LandPlants
LOC_Os10g30340.1 No alias alpha-class expansin 0.03 LandPlants
LOC_Os10g39110.1 No alias alpha-class expansin 0.03 LandPlants
MA_10425823g0010 No alias alpha-class expansin 0.04 LandPlants
MA_130258g0010 No alias alpha-class expansin 0.02 LandPlants
MA_14588g0010 No alias alpha-class expansin 0.02 LandPlants
MA_18265g0010 No alias alpha-class expansin 0.02 LandPlants
MA_274624g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_37884g0010 No alias alpha-class expansin 0.03 LandPlants
MA_474624g0010 No alias alpha-class expansin 0.02 LandPlants
MA_4979g0010 No alias alpha-class expansin 0.03 LandPlants
Mp1g14140.1 No alias alpha-class expansin 0.01 LandPlants
Mp1g24230.1 No alias alpha-class expansin 0.03 LandPlants
Mp1g26350.1 No alias alpha-class expansin 0.04 LandPlants
Mp5g20420.1 No alias alpha-class expansin 0.03 LandPlants
Mp8g18860.1 No alias alpha-class expansin 0.02 LandPlants
Pp3c12_4560V3.1 No alias expansin A9 0.04 LandPlants
Smo143857 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.01 LandPlants
Smo75237 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 LandPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.03 LandPlants
Zm00001e019433_P001 No alias alpha-class expansin 0.12 LandPlants
AMTR_s00001p00270650 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 SeedPlants
GSVIVT01025509001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 SeedPlants
GSVIVT01029411001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.03 SeedPlants
GSVIVT01032681001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 SeedPlants
Gb_01499 No alias alpha-class expansin 0.02 SeedPlants
Gb_20678 No alias alpha-class expansin 0.02 SeedPlants
MA_10377235g0010 No alias alpha-class expansin 0.01 SeedPlants
MA_104065g0020 No alias alpha-class expansin 0.01 SeedPlants
MA_14588g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_18265g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_274624g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_37884g0010 No alias alpha-class expansin 0.03 SeedPlants
MA_474624g0010 No alias alpha-class expansin 0.02 SeedPlants
MA_4979g0010 No alias alpha-class expansin 0.02 SeedPlants
Zm00001e004714_P001 No alias alpha-class expansin 0.03 SeedPlants
Zm00001e019433_P001 No alias alpha-class expansin 0.12 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007117 Expansin_CBD 160 237
IPR009009 RlpA-like_DPBB 64 149
No external refs found!