- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : pectate lyase
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00039p00186640 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G24230 | No alias | Pectate lyase family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g013762 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g19777 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g37853 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g16408 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21580 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g63228 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g65574 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene12080.t1 | Aspi01Gene12080 | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene17935.t1 | Aspi01Gene17935 | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0032.g024858 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1242 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.05G036500.1 | Ceric.05G036500 | EC_4.2 carbon-oxygen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.14G053300.1 | Ceric.14G053300 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.26G007400.1 | Ceric.26G007400 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G051100.1 | RHS14, Ceric.30G051100 | EC_4.2 carbon-oxygen lyase & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.30G051200.1 | RHS14, Ceric.30G051200 | EC_4.2 carbon-oxygen lyase & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g11741 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g12057 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g35840 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43009 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g43847 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46389 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g05863 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15970 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_12278 | No alias | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g05050.1 | LOC_Os04g05050 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g10584 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_101171g0010 | No alias | pectate lyase | 0.07 | OrthoFinder output from all 47 species | |
| MA_10205415g0010 | No alias | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| MA_10426822g0020 | No alias | pectate lyase | 0.08 | OrthoFinder output from all 47 species | |
| MA_1164682g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| MA_474372g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_6474333g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.05 | OrthoFinder output from all 47 species | |
| MA_66914g0010 | No alias | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| MA_91467g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| MA_91467g0020 | No alias | pectate lyase | 0.07 | OrthoFinder output from all 47 species | |
| MA_97947g0010 | No alias | pectate lyase | 0.09 | OrthoFinder output from all 47 species | |
| Mp3g01000.1 | No alias | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Mp8g00770.1 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g10190.1 | No alias | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26215 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g28391 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41164 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g41165 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c17_16370V3.1 | Pp3c17_16370 | Pectin lyase-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g03086 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g06396 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g27978 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003136 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1299 | 0.05 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0093.g019058 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1206 | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16922 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc02g093580.4.1 | Solyc02g093580 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g071840.3.1 | Solyc06g071840 | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g31391 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40115 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07683 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07726 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09317 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e008755_P002 | Zm00001e008755 | pectate lyase | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 173 | 356 |
| No external refs found! |