LOC_Os01g60660.1

Description : methionine-tRNA ligase

Gene families : OG_01_0001682 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001682_tree ,
OG_02_0005112 (LandPlants) Phylogenetic Tree(s): OG_02_0005112_tree ,
OG_03_0005291 (SeedPlants) Phylogenetic Tree(s): OG_03_0005291_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g60660.1
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AT2G40660	No alias	Nucleic acid-binding, OB-fold-like protein	0.1	Archaeplastida
Cpa\|evm.model.tig00000553.11	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Cre03.g145967	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.14	Archaeplastida
GSVIVT01032669001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	Archaeplastida
Pp3c15_24000V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.08	Archaeplastida
Solyc06g048610.3.1	No alias	methionine-tRNA ligase	0.12	Archaeplastida
Zm00001e028847_P003	No alias	methionine-tRNA ligase	0.13	Archaeplastida
AT2G40660	No alias	Nucleic acid-binding, OB-fold-like protein	0.1	LandPlants
GSVIVT01032669001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	LandPlants
Mp1g14330.1	No alias	methionine-tRNA ligase	0.01	LandPlants
Pp3c15_24000V3.1	No alias	Nucleic acid-binding, OB-fold-like protein	0.08	LandPlants
Solyc06g048610.3.1	No alias	methionine-tRNA ligase	0.11	LandPlants
Zm00001e028847_P003	No alias	methionine-tRNA ligase	0.13	LandPlants
AT2G40660	No alias	Nucleic acid-binding, OB-fold-like protein	0.1	SeedPlants
GSVIVT01032669001	No alias	Protein biosynthesis.aminoacyl-tRNA synthetase...	0.02	SeedPlants
Solyc06g048610.3.1	No alias	methionine-tRNA ligase	0.11	SeedPlants
Zm00001e028847_P003	No alias	methionine-tRNA ligase	0.13	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEA	Interproscan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002547	tRNA-bd_dom	254	349
IPR004046	GST_C	73	132

External Links

No external refs found!