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MA_95340g0010


Description : SSU processome assembly factor (SOF1)


Gene families : OG0004632 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_95340g0010
Cluster HCCA: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000269.111 No alias COMPASS-like H3K4 histone methylase component WDR5A... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001056.18 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g14855 No alias SSU processome assembly factor *(SOF1) & original... 0.02 OrthoFinder output from all 47 species
Mp5g11980.1 No alias SSU processome assembly factor (SOF1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 70 105
No external refs found!