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  5. MA_9521306g0010

MA_9521306g0010 (ATL2, TL2)


Aliases : ATL2, TL2

Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9521306g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT5G06490 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G20885 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G43420 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Ala_g00595 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ala_g28428 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ala_g32654 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g02285 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Als_g31953 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aob_g30636 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g13275 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Aop_g13505 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aop_g16315 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g26561 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g26562 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07191.t1 Aspi01Gene07191 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene16526.t1 XERICO, Aspi01Gene16526 E3 ubiquitin ligase *(BRH) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene37667.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Azfi_s0016.g014251 ATL2, TL2 not classified & original description: CDS=1-1224 0.02 OrthoFinder output from all 47 species
Azfi_s0034.g025209 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Azfi_s0048.g030554 No alias not classified & original description: CDS=1-690 0.07 OrthoFinder output from all 47 species
Azfi_s0051.g031286 No alias not classified & original description: CDS=1-726 0.08 OrthoFinder output from all 47 species
Cba_g43673 No alias E3 ubiquitin ligase *(BRH) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77129 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.18G057500.1 Ceric.18G057500 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.21G001000.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ceric.21G001100.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g00960 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Dac_g01390 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g02003 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Dac_g10168 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dac_g45788 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Dcu_g17960 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Ehy_g11854 RHA3A not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g14073 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g26619 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Gb_04644 ATL2, TL2 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Gb_26582 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Gb_41385 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os01g11500.1 LOC_Os01g11500 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os01g11520.1 LOC_Os01g11520 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os01g53500.1 LOC_Os01g53500 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g64620.1 LOC_Os01g64620 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36330.1 LOC_Os02g36330 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g54830.1 LOC_Os02g54830 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os05g15170.1 ATL63, TL63,... RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
LOC_Os06g11450.1 ATL31, CNI1,... RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os07g06560.1 LOC_Os07g06560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g00408 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Len_g29915 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Len_g59507 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
MA_114175g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_227897g0010 ATL2, TL2 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_391931g0010 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
MA_63503g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Mp3g00390.1 No alias RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Msp_g10125 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g39033 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Nbi_g03406 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.06 OrthoFinder output from all 47 species
Nbi_g04641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22098 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pir_g06078 RHA3B RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Pir_g59573 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004696 ATRING1, RING1 not classified & original description: CDS=1-576 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008576 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0199.g025564 ATL5 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g18767 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Sam_g25474 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Solyc01g109820.1.1 Solyc01g109820 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc02g085270.1.1 Solyc02g085270 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Solyc03g083460.3.1 Solyc03g083460 RING-H2 finger protein ATL22 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
Solyc07g006360.1.1 Solyc07g006360 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Spa_g29239 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g39500 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e008560_P001 RHA2A, Zm00001e008560 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e030930_P001 ATL3, Zm00001e030930 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Zm00001e032838_P001 Zm00001e032838 RING-H2-class E3 ligase 0.1 OrthoFinder output from all 47 species
Zm00001e034025_P001 RHA3A, Zm00001e034025 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 135 178
No external refs found!