LOC_Os01g59620.1

Description : class V/Su(var) histone methyltransferase component of histone lysine methylation/demethylation. methylated DNA binding component SUVH1/3 of SUVH-DNAJ methylation reader complex

Gene families : OG_01_0000257 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000257_tree ,
OG_02_0000718 (LandPlants) Phylogenetic Tree(s): OG_02_0000718_tree ,
OG_03_0001503 (SeedPlants) Phylogenetic Tree(s): OG_03_0001503_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: LOC_Os01g59620.1
Cluster	HCCA: Cluster_376

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00008p00103090	evm_27.TU.AmTr_v1...	Chromatin organisation.histone modifications.histone...	0.02	Archaeplastida
AMTR_s00008p00104700	evm_27.TU.AmTr_v1...	Chromatin organisation.histone modifications.histone...	0.02	Archaeplastida
AT2G35160	SUVH5, SGD9	SU(VAR)3-9 homolog 5	0.05	Archaeplastida
Cre02.g089200	No alias	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.04	Archaeplastida
GSVIVT01005913001	No alias	Chromatin organisation.histone modifications.histone...	0.03	Archaeplastida
GSVIVT01027942001	No alias	Chromatin organisation.DNA methylation.canonical...	0.03	Archaeplastida
Gb_22168	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
Gb_40999	No alias	class V/Su(var) histone methyltransferase component of...	0.03	Archaeplastida
MA_37876g0020	No alias	Histone-lysine N-methyltransferase, H3 lysine-9 specific...	0.02	Archaeplastida
MA_790260g0010	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
MA_95753g0010	No alias	class V/Su(var) histone methyltransferase component of...	0.04	Archaeplastida
Solyc03g093700.3.1	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
Solyc06g060960.3.1	No alias	class V/Su(var) histone methyltransferase component of...	0.02	Archaeplastida
Solyc09g082050.4.1	No alias	class V/Su(var) histone methyltransferase component of...	0.04	Archaeplastida
Solyc09g090810.3.1	No alias	class V/Su(var) histone methyltransferase component of...	0.08	Archaeplastida
Solyc10g077070.2.1	No alias	class V/Su(var) histone methyltransferase component of...	0.06	Archaeplastida
Zm00001e019503_P001	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e028400_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e033130_P002	No alias	class V/Su(var) histone methyltransferase component of...	0.04	Archaeplastida
AT5G04940	SUVH1	SU(VAR)3-9 homolog 1	0.02	LandPlants
GSVIVT01027942001	No alias	Chromatin organisation.DNA methylation.canonical...	0.03	LandPlants
Gb_40999	No alias	class V/Su(var) histone methyltransferase component of...	0.03	LandPlants
Solyc09g082050.4.1	No alias	class V/Su(var) histone methyltransferase component of...	0.04	LandPlants
Solyc09g090810.3.1	No alias	class V/Su(var) histone methyltransferase component of...	0.06	LandPlants
Solyc10g077070.2.1	No alias	class V/Su(var) histone methyltransferase component of...	0.05	LandPlants
Zm00001e019503_P001	No alias	no hits & (original description: none)	0.03	LandPlants
Zm00001e031994_P003	No alias	class V/Su(var) histone methyltransferase component of...	0.03	LandPlants
Zm00001e033130_P002	No alias	class V/Su(var) histone methyltransferase component of...	0.05	LandPlants
AT5G04940	SUVH1	SU(VAR)3-9 homolog 1	0.02	SeedPlants
MA_279935g0010	No alias	class V/Su(var) histone methyltransferase component of...	0.01	SeedPlants
Solyc09g082050.4.1	No alias	class V/Su(var) histone methyltransferase component of...	0.03	SeedPlants
Solyc10g077070.2.1	No alias	class V/Su(var) histone methyltransferase component of...	0.03	SeedPlants
Zm00001e019503_P001	No alias	no hits & (original description: none)	0.01	SeedPlants
Zm00001e031994_P003	No alias	class V/Su(var) histone methyltransferase component of...	0.03	SeedPlants
Zm00001e033130_P002	No alias	class V/Su(var) histone methyltransferase component of...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006325	chromatin organization	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006479	protein methylation	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008168	methyltransferase activity	None	Extended
MF	GO:0008170	N-methyltransferase activity	None	Extended
BP	GO:0008213	protein alkylation	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0008276	protein methyltransferase activity	None	Extended
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016278	lysine N-methyltransferase activity	None	Extended
MF	GO:0016279	protein-lysine N-methyltransferase activity	None	Extended
BP	GO:0016569	covalent chromatin modification	None	Extended
BP	GO:0016570	histone modification	None	Extended
BP	GO:0016571	histone methylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016741	transferase activity, transferring one-carbon groups	None	Extended
BP	GO:0018022	peptidyl-lysine methylation	None	Extended
MF	GO:0018024	histone-lysine N-methyltransferase activity	IEA	Interproscan
BP	GO:0018193	peptidyl-amino acid modification	None	Extended
BP	GO:0018205	peptidyl-lysine modification	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032259	methylation	None	Extended
BP	GO:0034968	histone lysine methylation	IEA	Interproscan
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0042054	histone methyltransferase activity	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043414	macromolecule methylation	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007728	Pre-SET_dom	459	557
IPR003105	SRA_YDG	279	430
IPR001214	SET_dom	576	708

External Links

No external refs found!

LOC_Os01g59620.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation