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  5. MA_938775g0010

MA_938775g0010


Description : transcription factor (bHLH)


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_938775g0010
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00041060 evm_27.TU.AmTr_v1... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.04 OrthoFinder output from all 47 species
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 OrthoFinder output from all 47 species
AMTR_s00063p00154030 ORG2, BHLH038,... Nutrient uptake.copper uptake.regulation.bHLH-Ib... 0.03 OrthoFinder output from all 47 species
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G62975 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G20970 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G25400 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G25410 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT5G51780 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G51790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 OrthoFinder output from all 47 species
Ehy_g30730 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_26737 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Gb_26744 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
Gb_31175 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_141559g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_14352g0010 No alias transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
MA_321195g0010 No alias transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_384190g0010 No alias transcription factor (bHLH) 0.01 OrthoFinder output from all 47 species
MA_57970g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_68586g0010 BHLH101 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
MA_93509g0020 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pir_g39777 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc02g078130.3.1 Solyc02g078130 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc03g114230.2.1 Solyc03g114230 Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g114237.1.1 Solyc03g114237 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc04g056535.1.1 Solyc04g056535 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc06g035490.3.1 Solyc06g035490 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc09g074805.1.1 Solyc09g074805 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Solyc10g079650.2.1 BHLH100, Solyc10g079650 transcription factor (bHLH). iron/copper homeostasis... 0.04 OrthoFinder output from all 47 species
Solyc10g079660.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.05 OrthoFinder output from all 47 species
Solyc10g079680.3.1 ORG2, BHLH038,... transcription factor (bHLH). iron/copper homeostasis... 0.01 OrthoFinder output from all 47 species
Solyc12g010585.1.1 Solyc12g010585 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 121 172
No external refs found!