AMTR_s00063p00018970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00063.3

Description : Cell cycle.mitosis and meiosis.chromatin condensation.condensin I complex.CAP-D2A component


Gene families : OG_01_0004845 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004845_tree ,
OG_02_0007535 (LandPlants) Phylogenetic Tree(s): OG_02_0007535_tree ,
OG_03_0009537 (SeedPlants) Phylogenetic Tree(s): OG_03_0009537_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00063p00018970
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT3G57060 No alias binding 0.18 Archaeplastida
Cpa|evm.model.tig00021070.118 No alias Cell cycle.mitosis and meiosis.chromatin... 0.04 Archaeplastida
Cpa|evm.model.tig00021070.119 No alias Cell cycle.mitosis and meiosis.chromatin... 0.02 Archaeplastida
Cre10.g432500 No alias Cell cycle.mitosis and meiosis.chromatin... 0.03 Archaeplastida
GSVIVT01033598001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.13 Archaeplastida
Gb_21478 No alias component CAP-D2A of condensin I complex 0.13 Archaeplastida
LOC_Os07g46540.1 No alias component CAP-D2A of condensin I complex 0.18 Archaeplastida
MA_10427588g0010 No alias component CAP-D2A of condensin I complex 0.1 Archaeplastida
Mp3g03650.1 No alias component CAP-D2A of condensin I complex 0.12 Archaeplastida
Pp3c3_32300V3.1 No alias binding 0.09 Archaeplastida
Solyc10g079730.3.1 No alias no hits & (original description: none) 0.11 Archaeplastida
Zm00001e035766_P001 No alias component CAP-D2A of condensin I complex 0.11 Archaeplastida
AT3G57060 No alias binding 0.18 LandPlants
GSVIVT01033598001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.14 LandPlants
Gb_21478 No alias component CAP-D2A of condensin I complex 0.13 LandPlants
LOC_Os07g46540.1 No alias component CAP-D2A of condensin I complex 0.16 LandPlants
MA_10427588g0010 No alias component CAP-D2A of condensin I complex 0.09 LandPlants
Mp3g03650.1 No alias component CAP-D2A of condensin I complex 0.12 LandPlants
Pp3c3_32300V3.1 No alias binding 0.09 LandPlants
Solyc10g079730.3.1 No alias no hits & (original description: none) 0.1 LandPlants
Zm00001e035766_P001 No alias component CAP-D2A of condensin I complex 0.12 LandPlants
AT3G57060 No alias binding 0.18 SeedPlants
GSVIVT01033598001 No alias Cell cycle.mitosis and meiosis.chromatin... 0.13 SeedPlants
Gb_21478 No alias component CAP-D2A of condensin I complex 0.11 SeedPlants
LOC_Os07g46540.1 No alias component CAP-D2A of condensin I complex 0.16 SeedPlants
MA_10427588g0010 No alias component CAP-D2A of condensin I complex 0.09 SeedPlants
Solyc10g079730.3.1 No alias no hits & (original description: none) 0.08 SeedPlants
Zm00001e035766_P001 No alias component CAP-D2A of condensin I complex 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR024324 Condensin_cplx_su1_N 77 246
No external refs found!