MA_93218g0010 (PGP11)

Aliases : PGP11

Description : ABC transporter B family member 4 OS=Arabidopsis thaliana (sp|o80725|ab4b_arath : 339.0)

Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_93218g0010

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00007p00263610	ABCB19,...	Solute transport.primary active transport.ABC...	0.05	OrthoFinder output from all 47 species
AMTR_s00018p00193820	PGP1, ABCB1,...	ABC transporter B family member 1 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
AMTR_s00048p00046670	PGP2,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00056p00132920	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
AMTR_s00090p00165440	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
AT1G27940	PGP13	P-glycoprotein 13	0.03	OrthoFinder output from all 47 species
AT3G62150	PGP21	P-glycoprotein 21	0.02	OrthoFinder output from all 47 species
AT4G01830	PGP5	P-glycoprotein 5	0.02	OrthoFinder output from all 47 species
AT4G18050	PGP9	P-glycoprotein 9	0.01	OrthoFinder output from all 47 species
Ala_g24244	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g09585	PGP10	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14091	ATPGP4, PGP4, ABCB4, MDR4	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14092	PGP21	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g18810	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Als_g39233	ABCB19,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aop_g11005	PGP11	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g50177	ATTAP1, TAP1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08453.t1	PGP11, Aspi01Gene08453	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene08454.t1	PGP11, Aspi01Gene08454	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene32172.t1	PGP2, Aspi01Gene32172	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene40552.t1	PGP1, ABCB1,...	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene42794.t1	ATPGP4, PGP4,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene46501.t1	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene52651.t1	PGP2, Aspi01Gene52651	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s2496.g111845	ABCB19,...	subfamily ABCB transporter & original description: CDS=142-3066	0.01	OrthoFinder output from all 47 species
Cba_g59935	ABCB19,...	subfamily ABCB transporter & original description: none	0.07	OrthoFinder output from all 47 species
Dac_g39907	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g12443	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g20621	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g13758	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g28462	PGP2	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
GSVIVT01032578001	No alias	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
Gb_02468	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_02469	No alias	subfamily ABCB transporter	0.04	OrthoFinder output from all 47 species
Gb_07563	ABCB19,...	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_13910	PGP2	ABC transporter B family member 2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Gb_32125	PGP11	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Gb_33057	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Gb_33058	ABCB19,...	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
LOC_Os01g18670.1	PGP21, LOC_Os01g18670	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
LOC_Os01g74630.1	PGP11, LOC_Os01g74630	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_100742g0020	PGP16	ABC transporter B family member 16 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_10436810g0020	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_107576g0010	No alias	subfamily ABCB transporter	0.03	OrthoFinder output from all 47 species
MA_18863g0020	PGP3, MDR3	ABC transporter B family member 3 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
MA_6870g0010	No alias	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
MA_8519205g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_934204g0010	No alias	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
MA_937278g0010	PGP17	ABC transporter B family member 17 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
MA_9589971g0010	PGP10	ABC transporter B family member 10 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Ore_g09833	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g22891	PGP13	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g30543	PGP18	subfamily ABCB transporter & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g33236	ABCB19,...	ABC-B-type transporter *(AMN3) & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g35743	No alias	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g38163	PGP1, ABCB1, ATPGP1	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g65660	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Pnu_g30303	PGP11	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Pp3c21_18190V3.1	ABCB19,...	ATP binding cassette subfamily B19	0.02	OrthoFinder output from all 47 species
Ppi_g54716	PGP3, MDR3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000035	PGP13	subfamily ABCB transporter & original description: CDS=555-4511	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0095.g019197	No alias	subfamily ABCB transporter & original description: CDS=1-2220	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023107	PGP2	subfamily ABCB transporter & original description: CDS=729-4781	0.01	OrthoFinder output from all 47 species
Solyc03g093650.3.1	Solyc03g093650	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc06g009280.1.1	PGP11, Solyc06g009280	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Solyc06g009290.4.1	PGP21, Solyc06g009290	subfamily ABCB transporter	0.01	OrthoFinder output from all 47 species
Solyc11g067300.2.1	PGP11, Solyc11g067300	subfamily ABCB transporter	0.02	OrthoFinder output from all 47 species
Spa_g21974	ABCB19,...	subfamily ABCB transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g26470	ABCB19,...	subfamily ABCB transporter & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g11197	PGP2	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g41085	ABCB19,...	subfamily ABCB transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	380	435
IPR011527	ABC1_TM_dom	195	291
IPR011527	ABC1_TM_dom	45	107

External Links

No external refs found!

MA_93218g0010 (PGP11)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation