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  5. MA_92848g0010

MA_92848g0010


Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_92848g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 ATL6,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00129p00065710 ATL2, TL2,... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
AT2G37580 No alias RING/U-box superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G42350 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62690 ATL5 AtL5 0.03 OrthoFinder output from all 47 species
AT5G01880 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G17600 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g03271 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ala_g28428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g04272 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aob_g06027 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aop_g67332 RHA3A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37667.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene46827.t1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene56880.t1 Aspi01Gene56880 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70368.t1 ATL8, Aspi01Gene70368 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0436.g069938 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Cba_g31712 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.15G044900.1 Ceric.15G044900 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G061600.1 ATL2, TL2,... RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G062000.1 Ceric.22G062000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.30G049300.1 Ceric.30G049300 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ceric.31G034400.1 Ceric.31G034400 not classified & original description: pacid=50574216... 0.03 OrthoFinder output from all 47 species
Ceric.33G012100.1 Ceric.33G012100 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ehy_g00845 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01023776001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01030125001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
GSVIVT01037142001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_04301 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g53500.1 LOC_Os01g53500 RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g36330.1 LOC_Os02g36330 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os03g44636.1 LOC_Os03g44636 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g50100.1 LOC_Os04g50100 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os06g09310.1 LOC_Os06g09310 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os06g34470.1 RHA1B, LOC_Os06g34470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g06560.1 LOC_Os07g06560 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os07g48680.1 LOC_Os07g48680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g24490.1 LOC_Os12g24490 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os12g42530.1 RHA3B, LOC_Os12g42530 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g05980 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Lfl_g10385 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Lfl_g31335 ATRING1, RING1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_101154g0010 ATL2, TL2 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_129306g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_214717g0010 RHA3B no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
MA_462422g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_634100g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g01610 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Msp_g18716 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g10421 ATL6 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g12550 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g20730 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ore_g28091 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ore_g32541 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Pnu_g03091 BRH1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30287 ATL2, TL2 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Ppi_g12248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo109459 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Solyc11g073170.1.1 Solyc11g073170 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Solyc12g094385.1.1 Solyc12g094385 E3 ubiquitin-protein ligase ATL23 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07793 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39301 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g34059 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.03 OrthoFinder output from all 47 species
Tin_g38882 No alias RING-H2-class ATL-subclass E3 ubiquiTin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e003264_P001 Zm00001e003264 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e007129_P001 Zm00001e007129 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e014302_P001 Zm00001e014302 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
Zm00001e016470_P001 Zm00001e016470 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e017960_P001 RHA3A, Zm00001e017960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e022781_P001 Zm00001e022781 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 85 128
No external refs found!