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  5. MA_92400g0010

MA_92400g0010 (RHA3B)


Aliases : RHA3B

Description : RING-H2-class E3 ligase


Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_92400g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
AMTR_s00044p00112360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
AT2G18670 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G17245 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from all 47 species
Ala_g01280 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.05 OrthoFinder output from all 47 species
Aspi01Gene22449.t1 Aspi01Gene22449 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Ceric.04G045600.1 Ceric.04G045600 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.22G021000.1 Ceric.22G021000 RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.29G079800.1 Ceric.29G079800 not classified & original description: pacid=50625628... 0.01 OrthoFinder output from all 47 species
Dde_g22839 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
GSVIVT01026703001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.06 OrthoFinder output from all 47 species
Gb_20666 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Gb_30879 XERICO Probable E3 ubiquitin-protein ligase XERICO... 0.04 OrthoFinder output from all 47 species
Gb_39486 No alias RING-H2 finger protein ATL16 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os01g60730.2 LOC_Os01g60730 RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g15110.1 LOC_Os02g15110 RING-H2-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os02g15120.1 ATL6, LOC_Os02g15120 RING-H2-class E3 ligase 0.06 OrthoFinder output from all 47 species
LOC_Os02g49710.1 LOC_Os02g49710 IDF1 iron uptake IRT1-ubiquitin ligase 0.06 OrthoFinder output from all 47 species
LOC_Os03g28080.1 ATL3, LOC_Os03g28080 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os09g29310.1 ATL6, LOC_Os09g29310 RING-H2-class E3 ligase 0.04 OrthoFinder output from all 47 species
Lfl_g27111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_1623327g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_280399g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_38494g0010 No alias RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species
Ore_g05275 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g09527 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0116.g021081 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Spa_g11938 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g22755 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase &... 0.02 OrthoFinder output from all 47 species
Zm00001e001923_P001 ATL3, Zm00001e001923 RING-H2 finger protein ATL60 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e010029_P001 XERICO, Zm00001e010029 ubiquitin protein ligase (XERICO) 0.03 OrthoFinder output from all 47 species
Zm00001e024866_P001 ATL43, Zm00001e024866 RING-H2-class E3 ligase 0.02 OrthoFinder output from all 47 species
Zm00001e035560_P001 ATL3, Zm00001e035560 RING-H2-class E3 ligase 0.01 OrthoFinder output from all 47 species
Zm00001e036691_P001 Zm00001e036691 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e037107_P001 Zm00001e037107 RING-H2-class E3 ligase 0.17 OrthoFinder output from all 47 species
Zm00001e041385_P001 Zm00001e041385 RING-H2-class E3 ligase 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 86 129
No external refs found!