Aliases : OTP82
Description : Pentatricopeptide repeat-containing protein At4g02750 OS=Arabidopsis thaliana (sp|q9sy02|pp301_arath : 553.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00268120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g29760,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00032p00177680 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00039p00023570 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00039p00130050 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
AT1G06140 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT1G09410 | No alias | pentatricopeptide (PPR) repeat-containing protein | 0.04 | OrthoFinder output from all 47 species | |
AT2G03880 | REME1 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G27610 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT3G01580 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT3G05240 | MEF19 | mitochondrial editing factor 19 | 0.03 | OrthoFinder output from all 47 species | |
AT3G25060 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G14820 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G33170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT4G37170 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT5G39680 | EMB2744 | Pentatricopeptide repeat (PPR) superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
AT5G40410 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
AT5G46460 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
Aev_g38515 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g13994 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Dde_g22114 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01008757001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01010125001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01010647001 | SLO1 | Pentatricopeptide repeat-containing protein At2g22410,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01011735001 | No alias | Pentatricopeptide repeat-containing protein At2g01510,... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01012174001 | No alias | Pentatricopeptide repeat-containing protein At2g03380,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01015468001 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01018098001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01019408001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021023001 | No alias | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01021774001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01022230001 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01025639001 | No alias | Pentatricopeptide repeat-containing protein At3g53360,... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01026025001 | No alias | Pentatricopeptide repeat-containing protein At3g13880... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01026881001 | No alias | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027839001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01029347001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01032394001 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01033304001 | CRR28 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.07 | OrthoFinder output from all 47 species | |
GSVIVT01033837001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01036943001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01037332001 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00194 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_00206 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_00409 | No alias | RNA editing factor (SLO2) | 0.04 | OrthoFinder output from all 47 species | |
Gb_01648 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_02379 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.06 | OrthoFinder output from all 47 species | |
Gb_04381 | No alias | Pentatricopeptide repeat-containing protein DOT4,... | 0.08 | OrthoFinder output from all 47 species | |
Gb_04616 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.05 | OrthoFinder output from all 47 species | |
Gb_07635 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_09794 | No alias | RNA editing factor (MEF7). RNA editing factor (MEF13) | 0.04 | OrthoFinder output from all 47 species | |
Gb_10151 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
Gb_10908 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_10985 | OTP84 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
Gb_11905 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_13369 | No alias | RNA editing factor (MEF12) | 0.06 | OrthoFinder output from all 47 species | |
Gb_14728 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Gb_15643 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_15666 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.05 | OrthoFinder output from all 47 species | |
Gb_16828 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.05 | OrthoFinder output from all 47 species | |
Gb_16848 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_16955 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23083 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_26696 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_27491 | OTP84 | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
Gb_28279 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.06 | OrthoFinder output from all 47 species | |
Gb_28612 | LOI1, MEF11 | RNA editing factor (MEF11) | 0.05 | OrthoFinder output from all 47 species | |
Gb_28780 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.07 | OrthoFinder output from all 47 species | |
Gb_29028 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
Gb_29877 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
Gb_29879 | CRR22 | RNA editing factor (MEF19). RNA editing factor (OTP82) | 0.08 | OrthoFinder output from all 47 species | |
Gb_29881 | OTP86 | Pentatricopeptide repeat-containing protein At4g21300... | 0.06 | OrthoFinder output from all 47 species | |
Gb_32051 | REME1 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_32439 | CRR22 | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Gb_32451 | CRR22 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_33117 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.04 | OrthoFinder output from all 47 species | |
Gb_33693 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_33726 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_34297 | CRR22 | RNA editing factor (OTP82) | 0.05 | OrthoFinder output from all 47 species | |
Gb_35395 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_38249 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_38503 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.05 | OrthoFinder output from all 47 species | |
Gb_41317 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g11700.1 | MEF19, LOC_Os03g11700 | Pentatricopeptide repeat-containing protein At4g21300... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os03g56850.1 | LOC_Os03g56850 | Pentatricopeptide repeat-containing protein At4g21300... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os04g57940.1 | CRR22, LOC_Os04g57940 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.06 | OrthoFinder output from all 47 species | |
LOC_Os07g47370.1 | LOC_Os07g47370 | Pentatricopeptide repeat-containing protein At4g32430,... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os08g39130.1 | LOC_Os08g39130 | Pentatricopeptide repeat-containing protein At2g29760,... | 0.04 | OrthoFinder output from all 47 species | |
MA_9463538g0010 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.05 | OrthoFinder output from all 47 species | |
Msp_g20955 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Pnu_g04435 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo99647 | No alias | Pentatricopeptide repeat-containing protein At5g27110... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g070710.3.1 | Solyc02g070710 | Pentatricopeptide repeat-containing protein At3g20730... | 0.05 | OrthoFinder output from all 47 species | |
Solyc07g042760.1.1 | Solyc07g042760 | Pentatricopeptide repeat-containing protein At4g31070,... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e001918_P001 | EMB2758, Zm00001e001918 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003562_P001 | REME1, Zm00001e003562 | Pentatricopeptide repeat-containing protein At2g03880,... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e010182_P001 | Zm00001e010182 | Pentatricopeptide repeat-containing protein At2g36980,... | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e010837_P001 | LPA66, Zm00001e010837 | Pentatricopeptide repeat-containing protein At5g48910... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e015358_P001 | Zm00001e015358 | Pentatricopeptide repeat-containing protein At5g39350... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e018565_P001 | Zm00001e018565 | Pentatricopeptide repeat-containing protein At3g13880... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e019971_P001 | Zm00001e019971 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e023504_P001 | CRR22, Zm00001e023504 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e027978_P001 | MEF1, Zm00001e027978 | RNA editing factor (MEF1) | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e030831_P001 | Zm00001e030831 | Pentatricopeptide repeat-containing protein At3g20730... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e031660_P001 | Zm00001e031660 | Pentatricopeptide repeat-containing protein At4g14170... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e033171_P001 | Zm00001e033171 | Pentatricopeptide repeat-containing protein At2g22070... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e035654_P001 | EMB2758, Zm00001e035654 | Pentatricopeptide repeat-containing protein At4g33990... | 0.11 | OrthoFinder output from all 47 species | |
Zm00001e036301_P001 | Zm00001e036301 | Pentatricopeptide repeat-containing protein At4g30700... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e037600_P001 | Zm00001e037600 | Putative pentatricopeptide repeat-containing protein... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e038919_P001 | Zm00001e038919 | Pentatricopeptide repeat-containing protein At5g15300... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e041048_P001 | OTP86, Zm00001e041048 | RNA editing factor (OTP86) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 315 | 364 |
IPR002885 | Pentatricopeptide_repeat | 642 | 688 |
IPR002885 | Pentatricopeptide_repeat | 541 | 588 |
IPR002885 | Pentatricopeptide_repeat | 153 | 199 |
IPR002885 | Pentatricopeptide_repeat | 61 | 98 |
IPR002885 | Pentatricopeptide_repeat | 256 | 286 |
IPR002885 | Pentatricopeptide_repeat | 481 | 510 |
IPR002885 | Pentatricopeptide_repeat | 617 | 641 |
IPR002885 | Pentatricopeptide_repeat | 450 | 479 |
IPR002885 | Pentatricopeptide_repeat | 716 | 739 |
IPR002885 | Pentatricopeptide_repeat | 228 | 254 |
IPR002885 | Pentatricopeptide_repeat | 416 | 444 |
No external refs found! |