LOC_Os07g40750 (Os07g0598500)


Aliases : Os07g0598500

Description : 27.3.67 RNA.regulation of transcription.putative transcription regulator Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_01_0000285 (Gene family) Phylogenetic Tree(s): OG0000285_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os07g40750
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G02370 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 Gene family
AT4G01990 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
AT4G02820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Gene family
AT4G21705 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Gene family
GSVIVT01002065001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
GSVIVT01014363001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
GSVIVT01020533001 No alias 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
MA_29755g0010 No alias 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Smo420704 PACid_15415117 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Solyc01g079320.3.1 Solyc01g079320.3 27.3.67 RNA.regulation of transcription.putative... 0.02 Gene family
Solyc02g078330.3.1 Solyc02g078330.3 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Solyc02g078350.3.1 Solyc02g078350.3 27.3.67 RNA.regulation of transcription.putative... 0.05 Gene family
Zm00001d009122 GRMZM2G143777 27.3.67 RNA.regulation of transcription.putative... 0.08 Gene family
Zm00001d013923 GRMZM2G135940 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family
Zm00001d032543 GRMZM2G131817 27.3.67 RNA.regulation of transcription.putative... 0.03 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 344 371
IPR002885 Pentatricopeptide_repeat 168 196
IPR002885 Pentatricopeptide_repeat 380 406
IPR002885 Pentatricopeptide_repeat 203 245
No external refs found!