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  5. MA_9108314g0010

MA_9108314g0010 (UBQ11)


Aliases : UBQ11

Description : Polyubiquitin 3 OS=Arabidopsis thaliana (sp|q1ec66|ubq3_arath : 288.0)


Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_9108314g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G31340 RUB1, ATRUB1, NEDD8 related to ubiquitin 1 0.01 OrthoFinder output from all 47 species
Ala_g16685 UBQ11 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22483 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.1 OrthoFinder output from all 47 species
Ala_g38104 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16406 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Als_g28952 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31254 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18726 UBQ14 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene20737.t1 UBQ11, Aspi01Gene20737 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23078.t1 UBQ4, Aspi01Gene23078 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23079.t1 UBQ4, Aspi01Gene23079 UBQ ubiquitin-fold protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23132.t1 UBQ4, Aspi01Gene23132 UBQ ubiquitin-fold protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23135.t1 UBQ11, Aspi01Gene23135 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g35419 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.12G072000.1 UBQ11, Ceric.12G072000 not classified & original description: pacid=50600951... 0.11 OrthoFinder output from all 47 species
Dac_g19304 No alias component *(eS31) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Dac_g32968 UBQ11 UBQ ubiquitin-fold protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_09451 UBQ11 ubiquitin-fold protein (UBQ) 0.03 OrthoFinder output from all 47 species
MA_115394g0010 UBQ11 ubiquitin-fold protein (UBQ) 0.04 OrthoFinder output from all 47 species
MA_4507637g0010 No alias Ubiquitin-40S ribosomal protein S27a OS=Solanum... 0.01 OrthoFinder output from all 47 species
Spa_g12172 RUB1, ATRUB1, NEDD8 RUB ubiquitin-fold protein & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000626 Ubiquitin-like_dom 3 74
IPR000626 Ubiquitin-like_dom 79 150
No external refs found!